Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2816 ATGGCTTCAAAAAATATCAGGGACGTTTTAACTGCGTTTAGTCCTTCTTTAGACTTGTTCGCTATCAGCACTGGAGATGGTCGTATAAAGATATGGGATACATTAAAGGGTCAGATTCAGACTGAGTTTGCGGACATTACATCAACTGATGCAACAAGCATATATGCTACATCCATGAAGGGGCATCTTTCAATAGATTATACATGCATGAAGTGGTTGTCGTTTGAAAGAAAGAAAAAAAGGAAACACACATCCTCATTGTTAGTACTTGGAACTGGTAGTGGTGATATTTTAGCACTTGATGTGTCTGCTGGTCAATTGAATTGGAGAATTAGTGACTGCCATCCTGGAGGTGCAAGAGCCATTTCATCTTCTGCAAATGGATCGTGTGTCTATACAGCAGGTGCAGATGGAATGATATGCAGAATTGATTGTGAGACAGGAAACCTGTTGGAGAAATTCAAAGCTTCTTCAAAGGCAATATCCTGTATGGATGTTTCTTCAGATGGGAATACAATAGCTACTGCAGCAGCACAGTTAAAGATTTTTAATTGTTCTGATCATCAGAAGATACAGAAGTTCTCTGGTCATCCTgGACCTGTCCGGTGTTTAGTCTTCACAGAAGATGGGAAGTATATTTTATCTTCAGCTGTTGGTGAAAGATATGTTGCAGTGTGGAGCATAGGTGGCGCCAAAAAGAAGTCAGCTAGCTGTGTTCTTGCAATGGATCATCCTGCTGTTTTTCTTGATAGCAGATGCACCCTTAGCAGGGAAGTTGACGAGGCTGGCATAAGCATTTTGGCTATCTCAGAAGTTGGCGATTgttatgtttggtttggtaACAGTATTGAAGAACTACGTAATGCAAAGCCCACTAAAATAGTATTATCTTTGGAAAACATGCCCTCCAAAAAGTCCATGAGGGCCTTGCCAGCAATATATGCTGCAAAATTACAAGGTGTTCACAAGCCTGCCTCTGGGCAGGTTTTCCTTGTTTATGGATTGCTTGTAAAGCCATCATTTCAAAAAATTCTTCTGCATTCTGGTTCAGACATAAATTTGAATGTCTCCAATGATGGTATTCTTCTCCCAATGAATCAGTCTCTAAAGTCTAAGAAGGGGACACAAAAAGTTTTGACAGTTACTACACTAGACCGTGCTAATGCAGAGGATGCTTTACTCCCAATTCCTAAGATTTTTGATTCtcatgagaaagagaaagcaTTTCAAGACTCCATGGACAAAGAGGTTATGGGTGAGGTGGTTAAAAGAAGTAGTAAAGCTGATTTTCCTGAGGTTGAAGATGAGATAGCCCCAGGTGAGACTGATGTAATTTGCATGGAGGACCGGATGAGATCACTAGGGATACTTGACGATGAAAGTGATCTTGAGTCTAATCTCAAATTTTGCTCTACGTTGTTGAAGGGTTTTGATCTTGAAGCTACTCTTCCAATGAAAAAGATAAGAGCAGCTGTTTTGAATATGGAGCCTAGTGAAGCATACAAGCTACTGGAAGTGTTGTTGGCTGCATGGCAATCaagGTCATCTATTGGAAAGTATGCTCTTCCATGGATATATAGCATATTAGTAAATCGTGGTCACTATGTCGTTTCTCAGGAACATGTGACACATATGCTTGATTCCTTATACAAGGTATCCTga 1662 0.3929 MASKNIRDVLTAFSPSLDLFAISTGDGRIKIWDTLKGQIQTEFADITSTDATSIYATSMKGHLSIDYTCMKWLSFERKKKRKHTSSLLVLGTGSGDILALDVSAGQLNWRISDCHPGGARAISSSANGSCVYTAGADGMICRIDCETGNLLEKFKASSKAISCMDVSSDGNTIATAAAQLKIFNCSDHQKIQKFSGHPGPVRCLVFTEDGKYILSSAVGERYVAVWSIGGAKKKSASCVLAMDHPAVFLDSRCTLSREVDEAGISILAISEVGDCYVWFGNSIEELRNAKPTKIVLSLENMPSKKSMRALPAIYAAKLQGVHKPASGQVFLVYGLLVKPSFQKILLHSGSDINLNVSNDGILLPMNQSLKSKKGTQKVLTVTTLDRANAEDALLPIPKIFDSHEKEKAFQDSMDKEVMGEVVKRSSKADFPEVEDEIAPGETDVICMEDRMRSLGILDDESDLESNLKFCSTLLKGFDLEATLPMKKIRAAVLNMEPSEAYKLLEVLLAAWQSRSSIGKYALPWIYSILVNRGHYVVSQEHVTHMLDSLYKVS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2816 553 ProSiteProfiles Trp-Asp (WD) repeats profile. 12 42 IPR001680 GO:0005515
Sto10g2816 553 PANTHER OS03G0300300 PROTEIN 1 552 - -
Sto10g2816 553 PANTHER OS03G0300300 PROTEIN 1 552 - -
Sto10g2816 553 SMART WD40_4 187 227 IPR001680 GO:0005515
Sto10g2816 553 SMART WD40_4 147 184 IPR001680 GO:0005515
Sto10g2816 553 SMART WD40_4 3 33 IPR001680 GO:0005515
Sto10g2816 553 SMART WD40_4 104 144 IPR001680 GO:0005515
Sto10g2816 553 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 228 IPR001680 GO:0005515
Sto10g2816 553 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 229 IPR011047 -
Sto10g2816 553 Pfam WD domain, G-beta repeat 8 33 IPR001680 GO:0005515
Sto10g2816 553 Pfam WD domain, G-beta repeat 189 226 IPR001680 GO:0005515
Sto10g2816 553 Gene3D - 3 141 IPR015943 GO:0005515
Sto10g2816 553 Gene3D - 142 282 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2816 115 250 U-box Gene Family AT2G33340 25.714 1.61e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2816 K14546 - gmx:100784148 804.283