LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto10g2810	TTGGAGTCATCGCCAGACAACCTCCGCTTCGTTCGCTGTTTCCTTCGGAGAAGGCTCCGACGAGGTGCTCTGCATGAATTAGATTTCACCGGCGGTCGTGCAATAACGTCGACCGGTAAAATCACCGATGAGATTTTGCGAACTCTGGCGGACGgtgacgaagaagaagaagctgatTGTTCCCCATATGTAGGAGGTCATGGTTTCCTTGAAGCTTCAGAAGCGGCTCGCCGCGAGCGTCCTCAAATGCGGAAGAGGCAAGGACAAAACATCAGGAAACTGGTGAAGGATGGTTTCATCATCAGGAAGCCAACTAAGATTCATTCCCGATCCCGTGCACGTAGAATGAAAGAGGCCAAGAGAAAGGGTCGTCACTCTGGATATGGTAAGCGCAAGGGTACTAGGGAGGCAAGGCTGCCAACAAAAATTCTGTGGATGAGGAGAATGCGTGTGTTGAGGCGTCTGCTTCGTAAGTATCGTGAATCCAAGAAAATTGACAAGCACATGTACCATGACATGTACATGAAGGTGAAAGGTAACGTGTTTAAGAACAAGAGGGTTTTGATGGAGAGCATCCACAAGTCTAAAGCTGAAAAGGCTAGGGAGAAAACTCTCTCAGATCAATTTGAGGCTAAGCGTGCTAAGAGCAAGGCAAGCAGGGAAAGAAAGTTGGCCAGGAAAGAGGAGCGTCTGGCACAGGGACCTGGAGAGAGGGCACCGCCTGCTGCATCACAACCAGTGTCTGAatttaattttatcattcatGTAGGGGAGCTAAGAAAACAAAGAAGTAAATCAAGTAATGATGGGCGAGACACAAAACACCAGGGCATGAGTGCTGAGGAGTGA	849	0.4711	LESSPDNLRFVRCFLRRRLRRGALHELDFTGGRAITSTGKITDEILRTLADGDEEEEADCSPYVGGHGFLEASEAARRERPQMRKRQGQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKLARKEERLAQGPGERAPPAASQPVSEFNFIIHVGELRKQRSKSSNDGRDTKHQGMSAEE	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto10g2810	282	PANTHER	60S RIBOSOMAL PROTEIN L19	88	247	IPR039547	GO:0003723\|GO:0003735\|GO:0022625
	Sto10g2810	282	SUPERFAMILY	Ribosomal protein L19 (L19e)	88	194	IPR035970	GO:0003735\|GO:0005840\|GO:0006412
	Sto10g2810	282	SMART	Ribosomal_L19e_2	69	196	IPR000196	GO:0003735\|GO:0005840\|GO:0006412
	Sto10g2810	282	MobiDBLite	consensus disorder prediction	194	234	-	-
	Sto10g2810	282	MobiDBLite	consensus disorder prediction	194	282	-	-
	Sto10g2810	282	Pfam	Ribosomal protein L19e	89	195	IPR000196	GO:0003735\|GO:0005840\|GO:0006412
	Sto10g2810	282	Gene3D	-	107	237	-	-
	Sto10g2810	282	MobiDBLite	consensus disorder prediction	107	129	-	-
	Sto10g2810	282	MobiDBLite	consensus disorder prediction	256	282	-	-
	Sto10g2810	282	MobiDBLite	consensus disorder prediction	107	135	-	-
	Sto10g2810	282	PANTHER	RIBOSOMAL PROTEIN L19	88	247	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto10g2810	Sto-Chr10	38158020	38162336	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto10g2810	89	246	Cytoplasmic Ribosomal Protein Gene Family	AT3G16780	87.037	4.27e-94	275

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto10g2810	K02885		-	sind:105165211	268.47