Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2809 ATGTGTGGAGGTGCCATCATCTCCGACTTCGTTTCCGAGAAACGTGGCCGGAAATTGACCGCTCATGACCTCTGGTCCGAGCTCGACGCCTACGACCTGCTTGGCTTCGACTCCACTATCCCGGctgcctcctcctcctccaaacACCCTCCTACTAATCTCCCCGCTCCCCCAAACAAACAAGgCGAGAAGAAAGAggtagagaagaagaagagtgagaGGACACGGAAGAACGTGTACAGAGGGATCAGGCAAAGGCCGTGGGGAAAATGGGCCGCCGAGATAAGGGACCCACACAAAGGCGTCCGAGTCTGGCTCGGCACTTTCAACACAGCCGAGGAAGCCGCCAGAGCCTACGACGAAGCCGCCAAGCGCATCCGCGGTGACAAAGCCAAGCTCAACTTCCCACCATCAGCTACTCCTCATCCCCGGCCGCCGCCTCCTCGAGCCGCGGAGCCTCCCCCTCCCGAGATGAGCCGACCCGCCAAGAAGCCGTGCCTGAACCCCGAGCCGCCCTCCGGGTTTGATCAGCCTCCTCAAAACGACGCCATCACTCTGCAGCAGCATCTCTCAAGCTTGGAGTCGCTCCTCGGCTTGCAGAATAACTACGAGCCGCAGCCGTATCAGCCGAGCGGGAGTACCGGTGGCGCGATGATGACTCAGTCTAATCAGTGGGACCCAACGGAGGAGCTGTGGATGCTGGACGACGTCGTTATGCATCACCTGCATAATCACCATAACCGCACCTGA 750 0.564 MCGGAIISDFVSEKRGRKLTAHDLWSELDAYDLLGFDSTIPAASSSSKHPPTNLPAPPNKQGEKKEVEKKKSERTRKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDEAAKRIRGDKAKLNFPPSATPHPRPPPPRAAEPPPPEMSRPAKKPCLNPEPPSGFDQPPQNDAITLQQHLSSLESLLGLQNNYEPQPYQPSGSTGGAMMTQSNQWDPTEELWMLDDVVMHHLHNHHNRT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2809 249 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Sto10g2809 249 MobiDBLite consensus disorder prediction 61 80 - -
Sto10g2809 249 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Sto10g2809 249 PANTHER DNA-BINDING DOMAIN 1 180 IPR044808 GO:0003700|GO:0009873
Sto10g2809 249 MobiDBLite consensus disorder prediction 201 221 - -
Sto10g2809 249 MobiDBLite consensus disorder prediction 128 182 - -
Sto10g2809 249 Pfam AP2 domain 79 128 IPR001471 GO:0003700|GO:0006355
Sto10g2809 249 SUPERFAMILY DNA-binding domain 79 138 IPR016177 GO:0003677
Sto10g2809 249 MobiDBLite consensus disorder prediction 41 81 - -
Sto10g2809 249 MobiDBLite consensus disorder prediction 138 176 - -
Sto10g2809 249 CDD AP2 80 138 IPR001471 GO:0003700|GO:0006355
Sto10g2809 249 PANTHER EREBP TRANSCRIPTION FACTOR 1 180 - -
Sto10g2809 249 SMART rav1_2 79 142 IPR001471 GO:0003700|GO:0006355
Sto10g2809 249 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Sto10g2809 249 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2809 Sto-Chr10 38141785 38143183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2809 1 241 AP2-EREBP Transcription Factor Family AT3G16770 46.691 2.31e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto10g2809 AP2 3.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2809 K09286 - vvi:100249982 196.823