Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto10g2809 | ATGTGTGGAGGTGCCATCATCTCCGACTTCGTTTCCGAGAAACGTGGCCGGAAATTGACCGCTCATGACCTCTGGTCCGAGCTCGACGCCTACGACCTGCTTGGCTTCGACTCCACTATCCCGGctgcctcctcctcctccaaacACCCTCCTACTAATCTCCCCGCTCCCCCAAACAAACAAGgCGAGAAGAAAGAggtagagaagaagaagagtgagaGGACACGGAAGAACGTGTACAGAGGGATCAGGCAAAGGCCGTGGGGAAAATGGGCCGCCGAGATAAGGGACCCACACAAAGGCGTCCGAGTCTGGCTCGGCACTTTCAACACAGCCGAGGAAGCCGCCAGAGCCTACGACGAAGCCGCCAAGCGCATCCGCGGTGACAAAGCCAAGCTCAACTTCCCACCATCAGCTACTCCTCATCCCCGGCCGCCGCCTCCTCGAGCCGCGGAGCCTCCCCCTCCCGAGATGAGCCGACCCGCCAAGAAGCCGTGCCTGAACCCCGAGCCGCCCTCCGGGTTTGATCAGCCTCCTCAAAACGACGCCATCACTCTGCAGCAGCATCTCTCAAGCTTGGAGTCGCTCCTCGGCTTGCAGAATAACTACGAGCCGCAGCCGTATCAGCCGAGCGGGAGTACCGGTGGCGCGATGATGACTCAGTCTAATCAGTGGGACCCAACGGAGGAGCTGTGGATGCTGGACGACGTCGTTATGCATCACCTGCATAATCACCATAACCGCACCTGA | 750 | 0.564 | MCGGAIISDFVSEKRGRKLTAHDLWSELDAYDLLGFDSTIPAASSSSKHPPTNLPAPPNKQGEKKEVEKKKSERTRKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDEAAKRIRGDKAKLNFPPSATPHPRPPPPRAAEPPPPEMSRPAKKPCLNPEPPSGFDQPPQNDAITLQQHLSSLESLLGLQNNYEPQPYQPSGSTGGAMMTQSNQWDPTEELWMLDDVVMHHLHNHHNRT | 249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto10g2809 | 249 | Gene3D | AP2/ERF domain | 79 | 137 | IPR036955 | GO:0003700|GO:0006355 | |
Sto10g2809 | 249 | MobiDBLite | consensus disorder prediction | 61 | 80 | - | - | |
Sto10g2809 | 249 | ProSiteProfiles | AP2/ERF domain profile. | 79 | 136 | IPR001471 | GO:0003700|GO:0006355 | |
Sto10g2809 | 249 | PANTHER | DNA-BINDING DOMAIN | 1 | 180 | IPR044808 | GO:0003700|GO:0009873 | |
Sto10g2809 | 249 | MobiDBLite | consensus disorder prediction | 201 | 221 | - | - | |
Sto10g2809 | 249 | MobiDBLite | consensus disorder prediction | 128 | 182 | - | - | |
Sto10g2809 | 249 | Pfam | AP2 domain | 79 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Sto10g2809 | 249 | SUPERFAMILY | DNA-binding domain | 79 | 138 | IPR016177 | GO:0003677 | |
Sto10g2809 | 249 | MobiDBLite | consensus disorder prediction | 41 | 81 | - | - | |
Sto10g2809 | 249 | MobiDBLite | consensus disorder prediction | 138 | 176 | - | - | |
Sto10g2809 | 249 | CDD | AP2 | 80 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Sto10g2809 | 249 | PANTHER | EREBP TRANSCRIPTION FACTOR | 1 | 180 | - | - | |
Sto10g2809 | 249 | SMART | rav1_2 | 79 | 142 | IPR001471 | GO:0003700|GO:0006355 | |
Sto10g2809 | 249 | PRINTS | Ethylene responsive element binding protein signature | 80 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Sto10g2809 | 249 | PRINTS | Ethylene responsive element binding protein signature | 102 | 118 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto10g2809 | Sto-Chr10 | 38141785 | 38143183 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto10g2809 | 1 | 241 | AP2-EREBP Transcription Factor Family | AT3G16770 | 46.691 | 2.31e-61 | 191 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Sto10g2809 | AP2 | 3.1e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto10g2809 | K09286 | - | vvi:100249982 | 196.823 |