Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2795 ATGCCTCCTCACACACTCTCCATTtccttcctcctcttcctcatttcacttcctctctctaaaccAGACCTCTCTTCTCAACGTCTCGCTCTTCTCTCTCTCCGTTCTTCCGTCCAAGGCCGTACACTCTTCTGGAATGTCTCCGACCACACTCCCTGCGCCTGGCCCGGCGTCCACTGCCAAAACGACAATGTCGTCGAGCTTCACCTCCCCGCCGTAGCTCTCTCCGGCCCAATCCCCACCGGCATCTTCCGCAACCTCACGCGCCTCCGTACTCTCAGCCTGCGTTTCAACGAACTCACCGGCGAGCTTCCCGCAGATCTCGCCTCTTGCGTCGATCTTCGGAACCTCTACTTGCAGCAGAATTCCCTCTCCGGTGAAATTCCCCAATTCTTGTTCCGTTTGCCGCGCTTGGTTCGGCTTAATTTGGCGTCGAACAATTTCTCCGGCGGGATTCCGGCGGGTTTCAACAACCTGACGAGGCTGAGGACTCTGTTTCTTGAAAACAACAACCTCTCAGGTCGCATCCCGGAGTTGGATTTGCTCAAGCTCGAACAGTTCAATGTGTCGAACAATTTGCTGAATGGGACTGTGCCGGTGAAATTGCAGAGTTTTTCGGAAGATTCGTTTATTGGGAATTCGCTGTGTGGGAAACCGCTTAAGCTCTGTACTGGAAGAGGGAATCCAGCTGGAGCTGCTGCGATTGGAATTTCTCCGACGGCTGGGATTGTGAATAGTGACGGAAgcatgatgatgaagaagaagaggaaattgTCAGGTGGTGCTATCGCTGGAATTGTGGTAGGATCTGcagtttttcttattttgattcttttctcTTTGATCATATTGTGCCGAAAAAGGAGTAATCAGAGAACAAGGTCGCTCGACATTtcaaatgagaagtttccagaAGTGGAAATTCCGGGTGGAAAAGAGGGAGAAATCGGTAATGGGGCTTCTGCTGAGGTATTGGGTAAAGGGACGTTTGGGACAGCATATAAGGCGGTTTTGGAGGTTGGACCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGAGTGTTTCAGAGAGGGAGTTCAAGGAGAAGATTGAAGGTGTGGGAGCAATGGATCATGAGAATTTGGTTCCTCTTAGGGCTTACTATTATAACAGGGATGAAAAGCTTCTTGTTTATGATTACATGCCCATGGGAAGCTTGTCTGCTCTTTTGCATGGAAACAAAGGGGCAGGAAGGACGCCACTAAATTGGGAAATGAGGTCAAGCATTGCTCTTGGGGCTGCTAGAGGCATTGAGTACCTACATTCACAAGGGACCAATGTTTCTCATGGAAACATAAAGTCATCCAACATCCTTCTTACCAGATCCTATGATGCCAGAGTATCTGATTTCGGCCTTGCACACCTTGTCGGTCCCTCCTCCACTCCCAACCGCGTTGCCAGCTACCGGGCACCGGAGGTAATTGATCCTCGCAAGGTATCACAAAAGGCCGATGTCTACAGCTTCGGCGTATTGCTCTTGGAACTTCTCACAGGAAAGGCTCCTACACATGCCCTCTTAAATGAGGAAGGAGTAGACTTACCTAGATGGGTTCAATCTGTTGTAAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTAAGGTATCAGAATGTTGAGGAGGACATGGTTCAGTTGCTGCAACTTGCTGTGGATTGTGTAGCACCATACCCGGATAAGCGCCCTTCAATGTCCGAAGTGACGAACCGGATTGAAGAGTTGAGAGGGATTAGGTTTAAAGATGATCAAAACCAAATCCAACAACAACCTGATCTGATCAGTGATTTAGATTATGTATCTTCTCTCTGA 1851 0.4635 MPPHTLSISFLLFLISLPLSKPDLSSQRLALLSLRSSVQGRTLFWNVSDHTPCAWPGVHCQNDNVVELHLPAVALSGPIPTGIFRNLTRLRTLSLRFNELTGELPADLASCVDLRNLYLQQNSLSGEIPQFLFRLPRLVRLNLASNNFSGGIPAGFNNLTRLRTLFLENNNLSGRIPELDLLKLEQFNVSNNLLNGTVPVKLQSFSEDSFIGNSLCGKPLKLCTGRGNPAGAAAIGISPTAGIVNSDGSMMMKKKRKLSGGAIAGIVVGSAVFLILILFSLIILCRKRSNQRTRSLDISNEKFPEVEIPGGKEGEIGNGASAEVLGKGTFGTAYKAVLEVGPVVAVKRLKDVSVSEREFKEKIEGVGAMDHENLVPLRAYYYNRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEMRSSIALGAARGIEYLHSQGTNVSHGNIKSSNILLTRSYDARVSDFGLAHLVGPSSTPNRVASYRAPEVIDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEDMVQLLQLAVDCVAPYPDKRPSMSEVTNRIEELRGIRFKDDQNQIQQQPDLISDLDYVSSL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2795 616 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Sto10g2795 616 Pfam Protein kinase domain 323 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2795 616 SUPERFAMILY Protein kinase-like (PK-like) 321 585 IPR011009 -
Sto10g2795 616 Gene3D Transferase(Phosphotransferase) domain 1 394 610 - -
Sto10g2795 616 Gene3D Phosphorylase Kinase; domain 1 316 393 - -
Sto10g2795 616 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Sto10g2795 616 SUPERFAMILY L domain-like 29 204 - -
Sto10g2795 616 CDD STKc_IRAK 325 588 - -
Sto10g2795 616 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Sto10g2795 616 PANTHER OS05G0588300 PROTEIN 4 301 - -
Sto10g2795 616 PANTHER OS05G0588300 PROTEIN 320 615 - -
Sto10g2795 616 Gene3D Ribonuclease Inhibitor 182 226 IPR032675 -
Sto10g2795 616 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 301 - -
Sto10g2795 616 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 320 615 - -
Sto10g2795 616 ProSiteProfiles Protein kinase domain profile. 319 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2795 616 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2795 Sto-Chr10 38038620 38041384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2795 23 599 Receptor kinase-like Gene Family AT1G48480 59.840 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto10g2795 Pkinase 7.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2795 - - jre:109006189 815.839