Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2769 ATGGAAGACACAAATTCAGTTGGAGTAATTTTGGACTTTCTCAGGAGGAATCAGTTCACAAGAGCTGAGGCAGCTTTGCGCAGTGAGCTCAATAATCGTCATGACCTAGATGGCTTCCATCAAAAGCTTACACTGGAAGAAAAGGCCGTACATGATGCATCAGAAAAGGATAAGGAAAGACCCCTGCTAGATAATCAAGGATTGGATTTTCATGACAATGTTGAAGTTTCCACAGAACTCATTGTGAAGGAAATAGAGTGTGGGACTGGTAGAAACGTGACTGAAAGCAAATTTAGAAGTACTCCTTATATTGGAGAAAGGAAAAAATCTGCTGAAGTGGTTGGGGCAAGTGACAAAAACTTCACTTTCCCAAAGAGTTCAGAGGATAGTGTGCTTGATCTTTACTCATGGAAGTTAAATCCTAGCAATGGTCCTGTAGAACATTTTCAAAATGATGGTGGTAGCAGTGCCAATAATAGTTTGAAGACCCAGGTTTCTCAGAAATCAAAGCATCAAACGAGTGAAGCTCTTGATATGATAAACAGAAACACAAAATCTGGAGAGGAAAATACTGTGCCAGCTGAACAAAGTTATGATGGTATGCAAGCCAAACAACCTAAGGAACTTGATCGCcaacctaaatccaaaaactcATCTTTTAAAGAGAACTTTGCTGATAATCCCTGGTTAAAAACAGATGAGAACGAGAGTTCCTCTTCAGACCTGTGGAAAGATTGTTCTGTCAAGACTGTTTTTCCCTTCTCCAAGGGGGATACATCTGCAACTTATAATGGTGCAACTTACTCTGGATATAAAGGGGAAAAAGGGACAGATATAATTGACATCAGAGCATCAATGAAAGCTCAAGTTGATGAAGTTGGGAGAGCTATTTATGCTGTCAAGTCACAAGGCAGTTCTGAAGAGAAGACTTTTGGCAGCTTAAATTTTCCTGTTGCACGTGAGAATCAAAAGGAAGAGTTACCTAGGCTTCCTCCTGTTAAACTCAAGTCAGAGGACAAGTCCTTGACTGTTAATTGGGAGGAGAAGTTTGAGCGGCATGAACCTGCTTCAAAACTTGCTGGTGCTGACAACAATTTACTTATAGGGTCATATCTAGATGTGCCTGTTGGACAAGAAATTAACCCTGCAGGTATGAGGAGAGCTGCAGGGGGCAGTTGGCTATCTGTAAGTCAGGGGATTACAGAGGATACATCCGATCTTGTATCTGGTTTTGCTACAGTTGGTGATGGGTGTGAATCTGTTGACTATCCAAATGAATATTGGGACTctgatgaatatgatgatgatgatgatgtcgGATACATGAGACAACCTATTGAGGACGAGGCCTGGTTTTTGGCACATGAAATTGATTATCCTAGTGACAATGAAAAGGCAACTGGGCATGGAAGTGTTCCTGATCCTCAAGATAGAAGTCCTGccaaagaggaagatgatgatcaATCTTTTGCTGAAGAAGATTCTTACTTTTCTGGTGAGCAATATGTTCAAGCAAAGAATGTTGAAGCAGTCATAACTTCAGATGATCCTATTGGTTTGACGATAACAGAagtgtatggaaggactaacaAGAATGAATTAATGGCACAATATGATGGACAACTGATGGATGAGGAAGAACTGAATCTAATGCGTGCAGAACCAGTCTGGCAGGGCTTTGTCTCTCAGACGAATGAACTTGTCTTGCTAGGAGATGGGAAGGCTTTTCATGACAGTGGAAGATCAAAACTTGAGGATATCTGCATTGATGATGACCACCACAGTTCGGTTAGATCAATTGGGGTGGGTATCAACAGTGATGCTGCAGATATTGGCAGCGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTAGTGAAGGGGATCTAGAATATCTCTGTGACCGCGATGTAGGAGTTGATTGCTCTAGAAACTCTCGGCATGATTTGGATAAGAAGTCTCTCAATAAATTGAACAAAAGTAAGAAGAAAAATGGCAAGAATGAAGGTGCATTCTTGCAGATGAATTCTCATACTGATGGAGGCTTCTCATTTCCCCTATCACTGAAAGATGGCCAGGTAATCCAGCCTGCCTCCAGTAAGCCCCTGTGGTCAAATAAATGCAATGCTGATGAAAATGATGACCATCTTAATGCATTTGTGAGACCTGATGACATGCTTACCCCATGGAGGCAGAAAAGCAGTGATTCTTCTCCCATTAAAAGTTCTAGGGATGAGAATAATGCTAATACTGTAGGATCCACTAACTCTTCTCCAACAGCAGTCTCAAATTATGGATATGCTGAAAGAGCTCATGTTAAGCTAGAGGAGGATGAAAAGGTTGGCATTGCGGAGGAAGAAGAGCTAGGGGCATCGCTGGAGGATGAGGAGGCTGCTGCTGTTCAAGAGCAATTAAGGCAAATAAAGGCCCAGGAAGAGGAATTTGAAACCTTCAATCTGAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCCGGGCGCTATCATGTTACTGAGTATTTGGGATCTGCTGCATTCAGCAAGGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTtgtgttaaaataataaagaacaACAAAGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTTAATAAACATGATCCTGCTGACAAGTATCACATTCTTCGATTGTATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCTAACTTATATGAGtttcataaatttaatagaGAATCAGGGGGAGAGGTATACTTTACAATGCCAAGATTGCAGTCAATTACAATTCAATGTTTGGAAGCGCTGCAGTTTTTGCATAGCCTTGGACTAATACATTGTGACCTGAAGCCAGAGAATATTTTGGTAAAAAGCTATAGTAGATGTGAGGTGAAGGTCATCGATCTCGGGAGTAGTTGTTATGAGACAGATCACCTTTGCTCATACGTTCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTTCGTATGACAAGAAGATTGATGTCTGGTCACTTGGCTGCATTTTGGCAGAACTTTGTACTGGAAATGTACTCTTCCAAAATGATTCACCTGCAACCTTGCTTGCTCGGGTAATTGGCATTATTGGTCCAATTGATCAAGCTATGCTTGCAAAAGGACGGGATACCTACAAGTATTTCACCAAAAATCATATGCTTTATGAACGAAATCAGGAAACCAACAGGTTAGAATACCTGATTCCGAAAAAGACATCCTTGAGACATAGATTACCTATGGGAGACCAAGGCTTCATTGACTTCGTTGGTTATTTGCTCGAGATCAACCCGAAGAAGCGGCCTTCTGCATCTGAGGCCCTCAAGCACCCATGGTTATCATACCCTTACGAACCCATATCATCTTGA 3477 0.3995 MEDTNSVGVILDFLRRNQFTRAEAALRSELNNRHDLDGFHQKLTLEEKAVHDASEKDKERPLLDNQGLDFHDNVEVSTELIVKEIECGTGRNVTESKFRSTPYIGERKKSAEVVGASDKNFTFPKSSEDSVLDLYSWKLNPSNGPVEHFQNDGGSSANNSLKTQVSQKSKHQTSEALDMINRNTKSGEENTVPAEQSYDGMQAKQPKELDRQPKSKNSSFKENFADNPWLKTDENESSSSDLWKDCSVKTVFPFSKGDTSATYNGATYSGYKGEKGTDIIDIRASMKAQVDEVGRAIYAVKSQGSSEEKTFGSLNFPVARENQKEELPRLPPVKLKSEDKSLTVNWEEKFERHEPASKLAGADNNLLIGSYLDVPVGQEINPAGMRRAAGGSWLSVSQGITEDTSDLVSGFATVGDGCESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKATGHGSVPDPQDRSPAKEEDDDQSFAEEDSYFSGEQYVQAKNVEAVITSDDPIGLTITEVYGRTNKNELMAQYDGQLMDEEELNLMRAEPVWQGFVSQTNELVLLGDGKAFHDSGRSKLEDICIDDDHHSSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYLCDRDVGVDCSRNSRHDLDKKSLNKLNKSKKKNGKNEGAFLQMNSHTDGGFSFPLSLKDGQVIQPASSKPLWSNKCNADENDDHLNAFVRPDDMLTPWRQKSSDSSPIKSSRDENNANTVGSTNSSPTAVSNYGYAERAHVKLEEDEKVGIAEEEELGASLEDEEAAAVQEQLRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCYETDHLCSYVQSRSYRAPEVILGLSYDKKIDVWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQAMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVGYLLEINPKKRPSASEALKHPWLSYPYEPISS 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2769 1158 MobiDBLite consensus disorder prediction 462 493 - -
Sto10g2769 1158 Gene3D Transferase(Phosphotransferase) domain 1 901 1149 - -
Sto10g2769 1158 SUPERFAMILY Protein kinase-like (PK-like) 836 1151 IPR011009 -
Sto10g2769 1158 CDD PKc_DYRK_like 847 1149 - -
Sto10g2769 1158 MobiDBLite consensus disorder prediction 721 762 - -
Sto10g2769 1158 SMART serkin_6 847 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2769 1158 Gene3D Phosphorylase Kinase; domain 1 841 928 - -
Sto10g2769 1158 MobiDBLite consensus disorder prediction 218 240 - -
Sto10g2769 1158 Pfam Protein kinase domain 847 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2769 1158 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1156 - -
Sto10g2769 1158 PANTHER - 2 1156 - -
Sto10g2769 1158 MobiDBLite consensus disorder prediction 145 240 - -
Sto10g2769 1158 Coils Coil 789 819 - -
Sto10g2769 1158 MobiDBLite consensus disorder prediction 728 762 - -
Sto10g2769 1158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 973 985 IPR008271 GO:0004672|GO:0006468
Sto10g2769 1158 ProSiteProfiles Protein kinase domain profile. 847 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2769 1158 MobiDBLite consensus disorder prediction 145 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2769 Sto-Chr10 37846520 37855467 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2769 846 1144 MAP Kinase Gene Family AT5G19010 30.625 2.01e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Sto10g2769 Pkinase 5.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2769 - - gmx:100798608 1744.17