Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2765 ATGCTAGGGCCTCGTTTCGATTTGTGTTTCAGCGATCCCGACGCTAGCTGGAGAGCCGCCGCACACGGCGGAGCATCCGCTGATCTCCGTCGCCGATTCCTCATTCATCCCGATAACTGGTGGTACACCGTATGGAAGCATTTCATTCTGATATGGGCAGTGTACTCTTCCTTCTTCACTCCAATGGAGTTCGGATTCTTCAGAGGTTTGCCGGAGGAAATCTTCCTACTCGACATCGCCGGTCAACTCGCTTTCCTCGTCGATATCATTGTCCGGTTCTTTGTGGCCTATCGTGACACCCACTCATATTGCATGGTCTACAATCGCAATCAAATTGCCATGAGgtACTTGAAATCTCGGTTCTTAGTTGATTTTCTGAGTTGTCTTCCGTGGGATTATATTTACAAGGCTACTGGCAGGAAAGAGCCAGTCAGGTACCTTTTATGGATTAGGCTAAGTCGAGCATGTAGAGTGACTGAATTTTTTGAGAGGCTGGAGAAAGATATTAGGATCAATTACCTCTTTACAAGAATTGTGAAACTTCTTGTGGTTGAACTTTATTGCACACACACAGCTGCCTGCATCTTCTACTATCTTGCTACCACTTTGCCCCCATCCGAGGAAGGTTATACATGGATAGGCAGCTTACAGATGGGTGACTATAGCTATTCAGACTTTAGACATATTAATCTTTGGAAGCGTTATGTGACATCACTCTACTTTGCAATTGTTACCATGGCAACTGTTGGTAAGATTCTTGCATATCTTTTACCCAAATTTGTAGCATTGATTGTGAAAGGATCAAAAACAGAGAGGTTCAGGGATAAAATGACTGATATTATTAAATACATGAATAAAAACAATTTGGATAAGCAGATAAGTAAGGCAATAAAAGGCCATTTGCGCTTACAGTATGATCGCAGTTACACTGAGGCTGCTGTTCTTCAGGATATTCCAGCCTCTATTCGCACAAAGATTTCAGTGAATTTGTATGAGCAGTTCATACAAAAAGTTTCTCTTTTCAAGGGATGCTCTATGGGCTTCATCAAGCAGATTGCAATCAGAGTCCATGAAGAGTTTTTCCTCCCAGGAGAAGTGATTATGGAACAAGAAAATGTAGCGGATCAACTTTACCTTGTATGCCATGGTGAGCTGGATGAGATAAGGACGGAAGATGGCGATAAAGAAGAGATAACTAATCATTTGCAAAATTACTGTTCCTTTGGCGAGGTTTCTTTTCTTTGCAATATACCTCAACCTTCCATGATACGGGCTCGTGAATTCTGCAAGGTTTTGAGACTTGATAAGCATTCCTTTACAGAAGCACTGAAGATATATTTTGCAGATGGTCAAGTTATCTTGAACAATCTCCTTGAGGGAAAAGATTCCAGTCTTAAGCTTAAGCTCTTGGAATCAGACTTCTCCTTGACTCTTGAAAAGCAGAAAACAGAGATGGCTATGAGAATGAATTGTGCTGCCTATGATGGGGACCTTCACCTTCTGAGACGTTTGATAGGATCAGGAGCAGATCCCAATAAGACTGATTATGATGGCAGATCACCCTTGCATATTTCTGCCTCTAAAGGATATGTAGATATTGCTTACTTTCTTATTGGACAAGGAGTAATGATAAATTTCTCAGATAAATTTGGGAATACACCCTTGCTTGAAGCCATCAAGAATGGACATGAAGAAGTAGCTTCTTTACTTGTGGATGCGGGGGCTACTCTTTCCATTGATCATGCTGGAAATTTTCTCTGCATGACTGTTGCAAAGAAGGAATTGGAACTTTTAAAAAGGGTTTTGGCTTATGGTATTAATCCAAATGCCAGAAATTATGACCAGCGAACACCTCTTCACATTGCTGCCTCTGAAGGTTTGTTTAAAATGGCTGAGTTGCTTGTAGAAGCAGGAGCAAGTGTTTTATCAAAGGACAGATGGGGAAATACACCGCTTGATGAAGCTCATATGGGTGGAAATAAGAATATGATCAGAATGCTTGAAGTTGCGAAAATTTCTCAGTTGGGTGAATTATCCCATAATACACAAGAAATACGGGATGAAATTCCAAAAAAGAAATGCACAGTATTTCCTTTCCATCCATGGGATCACAAAGCTGATAGAAGAGAGGGAGTTGTCCTATGGGTTCCAAAAAGCATGGAAGAGCTTGTGAAGGCAGCGAAGGAACATCTAAAATCTTCAAGTGGCTCCTGTATTTTATCAGAACACGGAGGTAAAGTCCTTGATGCAGACATGATTAGCAATGATGATAAGCTATTTCTGGTGAGTGAAGCACAAAATGAAAATGCATAA 2313 0.4107 MLGPRFDLCFSDPDASWRAAAHGGASADLRRRFLIHPDNWWYTVWKHFILIWAVYSSFFTPMEFGFFRGLPEEIFLLDIAGQLAFLVDIIVRFFVAYRDTHSYCMVYNRNQIAMRYLKSRFLVDFLSCLPWDYIYKATGRKEPVRYLLWIRLSRACRVTEFFERLEKDIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTLPPSEEGYTWIGSLQMGDYSYSDFRHINLWKRYVTSLYFAIVTMATVGKILAYLLPKFVALIVKGSKTERFRDKMTDIIKYMNKNNLDKQISKAIKGHLRLQYDRSYTEAAVLQDIPASIRTKISVNLYEQFIQKVSLFKGCSMGFIKQIAIRVHEEFFLPGEVIMEQENVADQLYLVCHGELDEIRTEDGDKEEITNHLQNYCSFGEVSFLCNIPQPSMIRAREFCKVLRLDKHSFTEALKIYFADGQVILNNLLEGKDSSLKLKLLESDFSLTLEKQKTEMAMRMNCAAYDGDLHLLRRLIGSGADPNKTDYDGRSPLHISASKGYVDIAYFLIGQGVMINFSDKFGNTPLLEAIKNGHEEVASLLVDAGATLSIDHAGNFLCMTVAKKELELLKRVLAYGINPNARNYDQRTPLHIAASEGLFKMAELLVEAGASVLSKDRWGNTPLDEAHMGGNKNMIRMLEVAKISQLGELSHNTQEIRDEIPKKKCTVFPFHPWDHKADRREGVVLWVPKSMEELVKAAKEHLKSSSGSCILSEHGGKVLDADMISNDDKLFLVSEAQNENA 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2765 770 Gene3D - 581 681 IPR036770 -
Sto10g2765 770 PANTHER POTASSIUM CHANNEL AKT1 254 765 IPR045319 GO:0005249|GO:0006813
Sto10g2765 770 PANTHER POTASSIUM CHANNEL AKT1 27 250 IPR045319 GO:0005249|GO:0006813
Sto10g2765 770 SMART ANK_2a 581 610 IPR002110 GO:0005515
Sto10g2765 770 SMART ANK_2a 614 643 IPR002110 GO:0005515
Sto10g2765 770 SMART ANK_2a 517 546 IPR002110 GO:0005515
Sto10g2765 770 SMART ANK_2a 550 579 IPR002110 GO:0005515
Sto10g2765 770 SMART ANK_2a 484 513 IPR002110 GO:0005515
Sto10g2765 770 Gene3D - 476 580 IPR036770 -
Sto10g2765 770 Gene3D Helix hairpin bin 268 329 - -
Sto10g2765 770 CDD CAP_ED 340 454 IPR000595 -
Sto10g2765 770 Pfam Ankyrin repeats (many copies) 602 655 IPR002110 GO:0005515
Sto10g2765 770 Gene3D - 43 263 - -
Sto10g2765 770 ProSiteProfiles Ankyrin repeat profile. 614 646 IPR002110 GO:0005515
Sto10g2765 770 SUPERFAMILY cAMP-binding domain-like 268 457 IPR018490 -
Sto10g2765 770 ProSiteProfiles Ankyrin repeat profile. 517 549 IPR002110 GO:0005515
Sto10g2765 770 ProSiteProfiles Ankyrin repeat region circular profile. 550 579 - -
Sto10g2765 770 Pfam Ion transport protein 43 250 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto10g2765 770 PANTHER POTASSIUM CHANNEL SKOR-LIKE 254 765 - -
Sto10g2765 770 PANTHER POTASSIUM CHANNEL SKOR-LIKE 27 250 - -
Sto10g2765 770 SUPERFAMILY Voltage-gated potassium channels 36 250 - -
Sto10g2765 770 SMART cnmp_10 340 458 IPR000595 -
Sto10g2765 770 ProSiteProfiles cAMP/cGMP binding motif profile. 340 443 IPR000595 -
Sto10g2765 770 Gene3D Jelly Rolls 330 449 IPR014710 -
Sto10g2765 770 ProSiteProfiles KHA domain profile. 693 770 IPR021789 -
Sto10g2765 770 ProSiteProfiles Ankyrin repeat region circular profile. 614 646 - -
Sto10g2765 770 Pfam Ankyrin repeats (3 copies) 491 577 IPR002110 GO:0005515
Sto10g2765 770 Pfam Cyclic nucleotide-binding domain 360 444 IPR000595 -
Sto10g2765 770 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Sto10g2765 770 Pfam KHA, dimerisation domain of potassium ion channel 692 761 IPR021789 -
Sto10g2765 770 SUPERFAMILY Ankyrin repeat 483 667 IPR036770 -
Sto10g2765 770 ProSiteProfiles Ankyrin repeat region circular profile. 517 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2765 Sto-Chr10 37813556 37826524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2765 32 646 Ion Channels AT5G37500 58.485 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2765 K21867 - jre:108993203 1090.87