Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2743 ATGGTGAGAAAAAGGAGAACTGAAGCACCCAGTGGAGGCGAAAGCTCTGAGACTCAACGACCTGCTGAAAGGAGTGTTCCACCCCCGCAACAGGCCGCTGGAGGGGGAGGACCCCAAGGAGGTAGAGTTTGGGGACCCCAAGGGGTACGGGGAGGTTATGGCGGGGGACGTGGCCGAGGAGTGCCCCAACAGCAGTATGGTGGTGCTGGTGGCCCTGAATATCAAGGTAGGGGGAGGGGCGGCCCCTATCAGCAGCAGGGAGTTCGGGGACGTGGCAGTGGGGTCATGGGCAGTGGCCGAGGTAGTGGACCTTCTTTTGGTGGACCCTCCCGACCTCAAGCTCCCGAGCTGCACCAAGCTACCCCAGTTCCATACCAACCTGGGGTGACTCCTCAGTCTACATTATCTGAGGCCAGTTCTTCTTCCCAGCAGCCTGAGATCACAGAACTGGAACAGCAAACAGGGCAGCTGACTATTCATTCAGAACCTGTTTCTCCTGCTCCACCCTCAAGTAAATCTATGAGGTTTCCCCTTAGGCCTGGTAAGGGTAGCACTGGCACCAGATGCATAGTTAAGGCAAACCACTTCTTTGCTGAGCTACCTAATAAAGATCTACATCAGTATGATGTTACTATCACACCAGAAGTGACATCAAGAGGAGTTAACCGTGCTGTTATGGAGCAGTTGGTGAGGTTATACCGTGAGTCTCATCTAGGAAAGAGACTTCCCGCATATGATGGGCGCAAGAGCCTTTACACTGCTGGTCCACTTCCTTTCCTTTCAAAGGAGTTCAGAATCACCCTTCTTGATGAAGATGATGGATCAGGAGGGCCTAGGCGTGAGAGGGAGTTCAAAGTTGTAATAAAATTGGCTGCCCGGGCAGATCTTCATCATCTGGGTCTCTTTTTACAAGGGAGGCAAACTGATGCTCCTCAGGAAGCACTTCAGGTTCTTGACATTGTTCTGCGTGAACTACCGACTACTAGGTATTGTCCTGTAGGGAGATCATTTTATTCTCCCGATCTAGGTAGAAGGCAACCACTAGGAGAGGGATTGGAGAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCCACTCAGATGGGATTATCTCTTAACATTGATATGTCATCCACTGCATTTATTGAACCATTGCCCGTGATTGACTTTGTGACTCAGCTTCTCAATAGGGAGGTCTCCACCCGTCCATTATCCGACGCCGATCGTGTAAAGATCAAGAAAGCACTTCGGGGTGTCAAAGTTGAAGTGACACATCGTGGAAATATGAGGAGAAAATATCGTATATCTGGTCTCACTTCACAGGCAACAAGAGAGCTGACATTCCCTGTTGATGAGAGGGGAACAATGAAATCTGTTGTGGAGTATTTCTCTGAGACGTATGGGTTTGTCATTAAACATACCCAGTGGCCTTGCCTTCAAGTGGGCAACACCCAGAGACCGAACTATTTACCAATGGAGGTTTGCAAGATAGTAGAAGGTCAACGGTACTCGAAGCGTTTAAATGAAAGGCAGATTACTGCTTTGCTCAAAGTAACATGCCAGCGTCCTGTTGAAAGGGAGCGTGATATTTTACAGACGGTTCATCACAATGCTTACCATGAGGATCCTTATGCCAAAGAGTTCGGAATTAAAATCAGTGAGAAGCTTGCCCAAGTTGAAGCTCGCATCCTTCCTCCACCCCGGCTTAAATATCATGATACAGGTAGAGAAAAGGATTGCCTACCTCAAGTTGGCCAATGGAATATGATGAACAAGAAAATGGTCAATGGTGGAGTAGTGAACCACTGGATATGCATAAATTTTTCCAGGAATGTCCAAGATACTGTGGCACGTGGGTTTTGTTATGAACTTGCTCAGATGTGTTATATATCTGGCATGGCATTCAATCCAGAGCCTGTACTTCCCCCACTCAGTGCTCGACCTGACATGGTGGATAAAGTTCTAAAATCACGGTATCATGATGCCACAACCAGACTTCAGGGAAAGGAGCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGATCTCTCTATGGTGACCTGAAACGTATTTGCGAAACAGATCTTGGTGTTGTTTCACAGTGCTGTTTGACCAAGCATGTCTATAAAATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATTAATGTTAAGGTTGGGGGGCGGAACACTGTCCTTGTTGATGCACTTTCACGGCGCATTCCATTAGTTAGTGACAGGCCTACAATTATATTTGGAGCTGATGTAACTCATCCACATCCTGGAGAGGACTCAAGTCCATCAATTGCGGCTGTTGTGGCTTCTCAAGATTGGCCTGAAATTACCAAGTATGCTGGATTGGTGTGTGCACAAGCTCATCGACAGGAACTTATCCAAGACCTTTACAAACAGTGGCAAGATCCAGTGAGGGGAACAATAACTGGTGGAATGATCAAGGAACTTCTCATATCTTTTCGGAGGGCCACAGGCCAGAAGCCACTGCGCATTATATTCTACAGGGATGGTGTGAGTGAGGGGCAGTTCTATCAAGTATTACTTTTTGAGCTTGATGCCATACGCAAGGCGTGTGCATCCTTGGAACCCAATTATCAGCCTCCTGTCACGTTTGTTGTGGTTCAAAAGCGGCATCACACCAGGCTCTTCGCCAGCAACCATCATGACAGGAATTCTGTTGACCGGAGTGGGAATATCTTGCCTGGCACAGTTGTAGACTCCAAAATCTGCCATCCTACTGAGTTTGACTTTTACCTCTGTAGCCACGCTGGGATACAGGGCACAAGCCGTCCAGCTCATTACCATGTGCTATATGATGAAAACGAATTTACAGCTGATGGATTGCAGACACTGACGAACAACCTCTGTTATACTTATGCTAGATGCACACGCTCTGTTTCCATTGTGCCTCCTGCATATTATGCTCATTTGGCTGCCTTCCGAGCACGATTTTATATGGAACCTGACACATCGGAGAGTGGATCTATGACAAGTGGTGCTGCTGCTGCACGCGGCATGGGTGCCGGACGTAGCACTCGGGCACCTGGTGCCAGTGCTGCTGTTAGGCCTCTTCCTGCCCTTAAGGAGAATGTGAAGAGGGTTATGTTTTACTGCTAA 3135 0.4781 MVRKRRTEAPSGGESSETQRPAERSVPPPQQAAGGGGPQGGRVWGPQGVRGGYGGGRGRGVPQQQYGGAGGPEYQGRGRGGPYQQQGVRGRGSGVMGSGRGSGPSFGGPSRPQAPELHQATPVPYQPGVTPQSTLSEASSSSQQPEITELEQQTGQLTIHSEPVSPAPPSSKSMRFPLRPGKGSTGTRCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFLSKEFRITLLDEDDGSGGPRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNREVSTRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFSETYGFVIKHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDILQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPPPRLKYHDTGREKDCLPQVGQWNMMNKKMVNGGVVNHWICINFSRNVQDTVARGFCYELAQMCYISGMAFNPEPVLPPLSARPDMVDKVLKSRYHDATTRLQGKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLYKQWQDPVRGTITGGMIKELLISFRRATGQKPLRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLYDENEFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSESGSMTSGAAAARGMGAGRSTRAPGASAAVRPLPALKENVKRVMFYC 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2743 1044 Pfam Argonaute linker 2 domain 524 570 IPR032472 -
Sto10g2743 1044 CDD Piwi_ago-like 542 992 IPR045246 -
Sto10g2743 1044 Gene3D - 741 1044 IPR036397 GO:0003676
Sto10g2743 1044 Pfam Argonaute linker 1 domain 332 382 IPR014811 -
Sto10g2743 1044 SMART DUF1785_2 331 383 IPR014811 -
Sto10g2743 1044 Pfam Piwi domain 673 992 IPR003165 GO:0003676
Sto10g2743 1044 ProSiteProfiles PAZ domain profile. 384 498 IPR003100 GO:0005515
Sto10g2743 1044 PANTHER PROTEIN ARGONAUTE 1A 82 1043 - -
Sto10g2743 1044 SUPERFAMILY Ribonuclease H-like 658 994 IPR012337 -
Sto10g2743 1044 Pfam Mid domain of argonaute 581 655 IPR032473 -
Sto10g2743 1044 ProSiteProfiles Piwi domain profile. 672 993 IPR003165 GO:0003676
Sto10g2743 1044 MobiDBLite consensus disorder prediction 1 184 - -
Sto10g2743 1044 SUPERFAMILY PAZ domain 191 535 IPR036085 GO:0005515
Sto10g2743 1044 CDD PAZ_argonaute_like 383 497 - -
Sto10g2743 1044 Pfam N-terminal domain of argonaute 188 322 IPR032474 -
Sto10g2743 1044 MobiDBLite consensus disorder prediction 1002 1022 - -
Sto10g2743 1044 SMART Piwi_a_2 672 993 IPR003165 GO:0003676
Sto10g2743 1044 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 82 1043 - -
Sto10g2743 1044 SMART PAZ_2_a_3 388 520 IPR003100 GO:0005515
Sto10g2743 1044 MobiDBLite consensus disorder prediction 125 168 - -
Sto10g2743 1044 Gene3D - 562 735 - -
Sto10g2743 1044 Pfam PAZ domain 388 513 IPR003100 GO:0005515
Sto10g2743 1044 Gene3D paz domain 377 502 - -
Sto10g2743 1044 Pfam Glycine-rich region of argonaut 70 162 IPR024357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2743 Sto-Chr10 37597650 37603403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2743 73 1044 Eukaryotic Initiation Factors Gene Family AT1G48410 81.716 0.0 1635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2743 K11593 - gmx:100780375 1746.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2743 10 37597650 37603403 Sto10g2743 10 37597650 37603403 ECH