Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2732 ATGGAAATACCTGCACCAGCATGTGAAGTGGTCGCACTTGTGGCGACTGCTAGGACTTCTTTTCCTTCTGTGGTGTTGCATGGAGAACTTGATTCTGAATCAagATGCTTAGCCTCTTTCTTGCTCCTCTCTTATCCAAGCTACAATCCTCCCTCGCCTCCTCCATTCACTTACCAGCGATGCCAACCACTGCCATTATCTGCATTAATGTCATCAGCTTCATTGCTCTCTGCTGTCACTCCAATAGGAGAGCAACAAATTGGACTTGCAACAGAAATACAACCTAATATTATCCAAGGGGGGTTCCAGTCAGCAGTCATTGTTCTACAAGGTTTATCAAGGATGCTCGGTCTTAGTTATGGAACTCTACTCTATGCTTGTATCTTTCTGCTTTTAAATCGTACTTTCTTAATTATGCTTAGGTTTTTTGGGTCCCGATTCTTGAGAAATCAAATGGCTGATAAACGCAACGAGGCCGATAAGAACATTGAGTTATGGAGGATCAAGAAACTGATCAAAGATTTGGAGGCTGCTCGAGGGAACGGGACAAGTATGATTTCCCTCATCATTCCCCCGCGCGATCAAATATCTCGTGTCACCAAGATGCTTGCTGATGAATTTGGAACTGCTTCCAACATAAAGAAGAGGGTGAATCGCCTTTCTGTTCTTGGCGCAATTACTTCTGCTAGGCAGAGGCTTAAGCTTTATCACAAGGTTCCCCCAAATGGGCTTGTTCTCTATACTGGGACAATTGTAACAGAAGAGGGTAAGGAAAAGAAGGTCACTATTGATTTTGAGCCTTTTAGGCCTATCAATGCTTCACTCTACCTTTGTGACAACAAGTTTCATTTAGAGGTTCTACATGAGCTCCTAGAGTGTGATGAAAAATATGGTTTTATTATCATGGATGGCAATGGTACACTTCTGGGGACATTGAGTGGTAACACTAGGGAGATTCTTCATAGATTTACTGTGGATCTTCCAAAGAAACATGGAAGGGGAGGGCAGTCGGCTCTTCGATTCGCCCGTCTTCGGACGGAGAAGTGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCTACACAATTCTTTATCAATCCTGCTACCAATCAGCCCAATGTTGCTGGATTGATTCTTGCTGGTTCTGCTGATTTCAAAACTGAGCTTAGTCAATCAAACATGTTTGATCCTCGGCTTCAGGCGAAAATACTTAAGGTTGTTGATGTGTCATCTGGAGGGGAGAGTGGCTTCAATCAGGCCATTGAACTTTCTGCTGAGGTTATGTCAAATGTGAAGTTCATCCAGGAGAAACGCTTGATTGGGAAATACTTGGAGGAGATTGGTCAGGATACTGGGAAGTATGTTTTTGGTGTTGATGATACTCTAAAGGCTCTGGAGATGGGTGCTATTGAGACACTTATTGTTTGGGAGTTTCTGGATATGAATAGGTATGTCTTGAAACATAGCACCACAGGTGAGATTGTTAAGAAATACTTGAACAAGGAACAAGAGGTAAATCAGGAGAATTTTGCTCAGTATGAGGTTCAGGAAAAGATGTCTCTTGTGGATTGGTTTGCAGATGAGTACAAACAGTTTGGTTGCACACTTGAGTTTGTCACTAATAAATCACAAGAAGGTTCACAGTTTTGTAGAGGCTTTGGTGGCATAGGGGGGATCCTGCGTTACAAGCTTGATATGAGATCATTTGATGATTTCTCTGAGGATGGAGAAGAGATTGAGAAGGAAATACCTGCACCAGCATGTGAAGTGGTTGCACATGTGGTGACTGCTAGGACTTCTTTTCCTTCTGTGATGTTGCATGAAAATTTTGATTCTGAATCAAGGCCTCCTCAATTCACTCACTGGCAATGCCAACAGCTGCCTTTATCTGCAATAACATCATCAGcttcatcgCTCTCTACTGTCACTCCAAAAGGAGAGCAACAAATTGGACTTGCAACAGAAACACATCCTAATGTCATCAAAGGTTGCATAGCATTGGCGAAGGAGAAGCTCTCTCACTTACGCAATCTGCCAAGAGGTTATGTAGGGGGTTCCAGTGATTGTCCTCCAAGATCTTAG 2082 0.428 MEIPAPACEVVALVATARTSFPSVVLHGELDSESRCLASFLLLSYPSYNPPSPPPFTYQRCQPLPLSALMSSASLLSAVTPIGEQQIGLATEIQPNIIQGGFQSAVIVLQGLSRMLGLSYGTLLYACIFLLLNRTFLIMLRFFGSRFLRNQMADKRNEADKNIELWRIKKLIKDLEAARGNGTSMISLIIPPRDQISRVTKMLADEFGTASNIKKRVNRLSVLGAITSARQRLKLYHKVPPNGLVLYTGTIVTEEGKEKKVTIDFEPFRPINASLYLCDNKFHLEVLHELLECDEKYGFIIMDGNGTLLGTLSGNTREILHRFTVDLPKKHGRGGQSALRFARLRTEKCHNYVRKTAELATQFFINPATNQPNVAGLILAGSADFKTELSQSNMFDPRLQAKILKVVDVSSGGESGFNQAIELSAEVMSNVKFIQEKRLIGKYLEEIGQDTGKYVFGVDDTLKALEMGAIETLIVWEFLDMNRYVLKHSTTGEIVKKYLNKEQEVNQENFAQYEVQEKMSLVDWFADEYKQFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYKLDMRSFDDFSEDGEEIEKEIPAPACEVVAHVVTARTSFPSVMLHENFDSESRPPQFTHWQCQQLPLSAITSSASSLSTVTPKGEQQIGLATETHPNVIKGCIALAKEKLSHLRNLPRGYVGGSSDCPPRS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2732 693 SMART eRF1_1_2 156 292 IPR005140 -
Sto10g2732 693 Gene3D eRF1 domain 2 288 429 IPR042226 -
Sto10g2732 693 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 158 292 IPR024049 -
Sto10g2732 693 SUPERFAMILY Translational machinery components 294 428 - -
Sto10g2732 693 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 152 580 - -
Sto10g2732 693 Gene3D eRF1 domain 1 149 287 IPR024049 -
Sto10g2732 693 Gene3D - 431 581 IPR029064 -
Sto10g2732 693 SUPERFAMILY L30e-like 430 566 IPR029064 -
Sto10g2732 693 Pfam eRF1 domain 3 433 564 IPR005142 -
Sto10g2732 693 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 152 580 IPR004403 GO:0003747|GO:0006415
Sto10g2732 693 Pfam eRF1 domain 1 170 290 IPR005140 -
Sto10g2732 693 Pfam eRF1 domain 2 296 429 IPR005141 -
Sto10g2732 693 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 165 563 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2732 Sto-Chr10 37497211 37507297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2732 152 580 Eukaryotic Initiation Factors Gene Family AT3G26618 81.839 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2732 K03265 - egr:104419069 726.857