LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto10g2701	ATGATAAGACTTTTTCTTGTAACTTTGAAGGGTACTGATGAAGTTGAAGTCATAATTCAGAAGTCGTGGAACTATAGTGGTGGTGTCCAATATCTTCCCAACAGTTTAAGAGTTCTGGAATGGGTGGGATATCCATCACCTTGCTTACCACCAGATTTTCGTCCAAAGAAACTTTCCGTACTCAACTTGGAACAGAGTTGCATCTCATCCCTCAAACCGCTCATGGCAAGTAGATTTATGGATTTGAGTGTCTTGAATTTTGACTTGTGTGAAGGGATAACACAAATACCTGACATATCTTGCCTTCCAAATTTAAGGAAATTGTCATTTATGGATTGTGTTAATTTAGTTGAAGTTCACGATTCAGTTGGATCTTTGGGTAAACTCAGAATCTTGCAAGCCAACTCTTGCCCCAAGCTCAGGACTCTTCCACCACTTGCCATGAGCACTCTAGAAAGACTTGACCTTACGTTTTGCTCAAGTGTTGAGGCTTTTCCTGATATATtaggagagaagaagaagatgaaaaggcTTGACCTATTTGGGATTGGGACTGCCTTGAAATTTCCGTCTTCAATTCAAAATCTTACTGGACTTCGAATATTAGACATGCAAAATTGCAGAAGGATTCAGCTACCAATCCACATTGCTATGTTGCCAGAATTGGAACTACTACATATTAGAAAGTGTAGGGAGTTGGAATTTTCTAAGCAGGATGAAGGCATAGAAAAGGGGAGCTTCATAATGTGCCCGAAGATGGACCATCTTGTCATTGGGCATTGCAATATATCAGATGAATCACTTTCATTATGTCTTTCTTGGTTTGTCAATGTGAAGACATTGAATCTACAGGGTAGTAATTTCACAATTCTTCCTGCATGCATCAACAAATGTCGCTTCTTGACATCGATTGATTTGGAAAATTGCGGGCGTCTTCAAGAAATTAGAGGGGTTCCACCAAACATACAATATTTATCAGCAAAGAACTGCACATGGTTGAGTTCCGAGTCCACAAGCATATTACTAAGTGAAGAATTGCACAATACTGGTGGCAAAATATTTTCTCTGCCTCAAGCAACAATCCCTGAATGGTTTGACCATCGTACTGAGGGCGGATCTATTTCCTTCTGGTTTCGTAACAAATTCCCAGCATTAGTTGTATGTGTTGTTATTGGATTAACAAATGAGAACTTTTTCTCTATCAATTTTTACCCCCACGTGATCATCAATGGCATTTATCAATTTTGTGCCCGTGGATTTGGTCACACTTTCGAAGTAGTATCAGATCATATATTGGTTTTTGATCTGCGAAGTATAGAATTTAGTGATAAGGTGGAAGACTTATATCTGGAAAAGGAGTGGAATTATGCGGAGATTTCTTATGAAGCATCTTTTTCTGATCCTGTATGGCGTTCCTACGTGGTCTCAATCGAAGAGGTCACACAGGAGAGTGGAATTTATGTATTGAAGGAGATAAACAAGATGGAGGATATCAGATTCACAAATCCTTATATGGACAATGAGATATGTAGCCATGCACCTTCAGAAGCAATGATTTCAGGCTTAGATTCAACAATGTCAAGCAGCATGATTAGGGACACTAGTAGTAGTTATGGAGATGATGAGGGCAATGATGTGATGAGATCCCACCAAGATGACCACTCCCAATTCTCACTATCTGCTTTAATCTCTTCGGTTGTCTCACTCTGCTCTTCTTCGTAA	1722	0.3879	MIRLFLVTLKGTDEVEVIIQKSWNYSGGVQYLPNSLRVLEWVGYPSPCLPPDFRPKKLSVLNLEQSCISSLKPLMASRFMDLSVLNFDLCEGITQIPDISCLPNLRKLSFMDCVNLVEVHDSVGSLGKLRILQANSCPKLRTLPPLAMSTLERLDLTFCSSVEAFPDILGEKKKMKRLDLFGIGTALKFPSSIQNLTGLRILDMQNCRRIQLPIHIAMLPELELLHIRKCRELEFSKQDEGIEKGSFIMCPKMDHLVIGHCNISDESLSLCLSWFVNVKTLNLQGSNFTILPACINKCRFLTSIDLENCGRLQEIRGVPPNIQYLSAKNCTWLSSESTSILLSEELHNTGGKIFSLPQATIPEWFDHRTEGGSISFWFRNKFPALVVCVVIGLTNENFFSINFYPHVIINGIYQFCARGFGHTFEVVSDHILVFDLRSIEFSDKVEDLYLEKEWNYAEISYEASFSDPVWRSYVVSIEEVTQESGIYVLKEINKMEDIRFTNPYMDNEICSHAPSEAMISGLDSTMSSSMIRDTSSSYGDDEGNDVMRSHQDDHSQFSLSALISSVVSLCSSS	573

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto10g2701	573	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	26	395	IPR044974	GO:0006952
	Sto10g2701	573	SUPERFAMILY	L domain-like	23	341	-	-
	Sto10g2701	573	Gene3D	Ribonuclease Inhibitor	8	236	IPR032675	-
	Sto10g2701	573	MobiDBLite	consensus disorder prediction	530	551	-	-
	Sto10g2701	573	Pfam	C-JID domain	356	429	IPR045344	-
	Sto10g2701	573	PANTHER	NB-ARC DOMAIN PROTEIN	26	395	-	-
	Sto10g2701	573	Gene3D	Ribonuclease Inhibitor	237	362	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto10g2701	Sto-Chr10	37233462	37235577	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto10g2701	28	234	WRKY Transcription Factor Family	AT4G12020	34.562	2.66e-22	100