Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2697 ATGGCGGAAACTCCTAATAGTTCTTCTAATAAAGTGAAAGATGGTTCTGCTCTTATTAATTCTGGATCTACTGGATCTGGTGATTCTAATAGTGGATTCTACCGTAGAGATCCACTCTACTTGCATCCTACGGATCACACTGGCTTGCAGCTGGTGTCTATCTCGCTCACACCGAGCAATTACATGATTTGGAGCCGTTTCATGAAGATTGCTCTCAAATCCAAAAATAAATTAGGCTTTGTGGATGGTACTTGTCCGAAGCCTACTGATGAGAATTCTGACAGATTCTTTCAATGGAGCTTTGCTGATTCAACTGTAACTGCTTGGATCGTTAATTCGATGTCTAAGGATCTGGCGGAGGCGTACGTCTTCACTACTTCAGCTAGGAGGTTATGGCAGACACTTGAGGACAAGTATGGTAAAGCTGCTAAACCTCAagtttttcatattaaaaagaagTTAGCTGCTATAAAACAGAATGGTGAATCCTTAGCTGTGTATTCTACTAAACTTGAAAAATATTGGGAAGAATTGAATTCTTTAGAGCCTAAAATACGATGTTCTACTGAACATAGTAGTTGTTGTCACTCAAATAAACAGCATGATGATAGAGATTCTTCCAATCAAGTAATGCAATTTTTAATGGGACTTGATGATTGCTATGATACGGTTGTAAACAATATCCTCATGCTAGAGCCTACACCATCGTATAATAAGGTGTATGCTATTGTAGCAACTGTAGAGAGTAAAAAGGAAGTCATGGCAGAGACAGCATCTAGTACTGAGGCTACTGCTTTAGCTGTCAAAAATTTTGAGCAGTCTAAATATAATTCTGTTAATAGAAGTGGTTCTTCTGGAAATAAGAAGGACGTTAAGAAGGGTGACAGGTTTTGCACTGTTTGTAATAAGCCCGGCCATATGGAGGATACGTGTTTTAAAAAGCATGGAATTCCAGAATGGTATACAGAGTATAAAGCTCAGAAAAGTAAGAAGACCCAGTCATTCTCCAGCAATGTTAGCACTGTTGATAGCGCTTCTCAGAGCAGTAATGGTGTTGACATGTCCTTGTTTTCTGAGATGATTCAGAAGGAATTACAAAAATTCATGAAAAGCAAGGCGAGTAGTGAGGAGAAGACTGTGAACACATCCTGCTTTGCTGATTTTGCAGGTAATGTTCACTCTTATTCTGATATGGTTTTTCAGAATGGTAATTGGATTATTGATAGTGGCGCTTCTAGCCATATTTCTGGTGATTTAACCTTGTTTTCATCTTTAAGGGATGTAAACAATAGCAATACTGTTTTGCTTCCTGATGGTACTGTGAAGAAGGTAAAGCATATAGGTGAAGTGCGAATTAATGATAAGATTCTGCTTAAGGAGGTTCTTTATGTCCCGGATTTTCGTTACAATCTGATTTCTGTTCACCGATTAGCAGAAAGTGGACAGATGCAATTCATGTTTGATGGTTCTACATGTATTGTGCAGGACCTTTTGAATAAGGAGGTGTTGGCAGTAGGAATCGTAAGGAAGCATCTATACATTCTCAATAAGGAGCAAGTGAATTTACTAGCCCTTTGTAATAGTGATAGTGTTGAACACAATGTTTaCACAAAGGTGGATTCATGCTCTAAGTCTACTCTATCTGAATCTAAGATATTCCCTGATTATGGTTTTGATCAAAATAATTCTTTATCCCATCATACGGATGCCGTATCTTCTCCACAAGTTACTAGTGCTACTCCTAATTCTGGTGTTGATATTCTGGTAGAGTCTCAGATTGTTTCTGATTCTCCTCCTCCTATTATTCCTCAAGCTGAATCACGACGGCCTACAAGAGTTAGTAGGAAGCCTACTTGGCTTCAGGACTATGTTACTTGCAGTATGGGCAGAGCTGATGAATATACTCCCAAGGCTTATCCTTTCATTCAACCTAAGTCTTGTTCTCCGGATTACTTGCATTTTCTTAGTGCTGGGACTGACAACATTAAGGTCATAATTCAGAAGTATTTGTCTGAAGACATAGAAAAATTGGAAAATCTAAGTGTTATAAATCTGAGCAGAAGTCAATTTATAACGCAGATTCCTGATGTATCAAGCATtccaaatttaacaaaattgaatTTGGGTTGTTGTAAGAATTTAATTGAAGTTCATGAGTCCGTTGGACATCTGAAAAAACTTAGAATCTTGGATGTTCAATGGTGTGTCAAGCTTACAACTTTTCCATGTCGCATCAAGTTGCCCTCTCTTGAATATCTTGGACTTCAGCATTGCTCAAGTCTTAAGAAGTTTCCAGAAATACAAGAAAAGATGGAATGCATTACAAGCCTTGACTTGAGTGACACAAACTTAGAATTGCCCACTTCAATATGTAATCTTGTTAGGCTTCACGCATTAATTGCAGATAAGTGCAGTGGACTTCAGCTACCAAGCAGCATTGCTATGTTGCCAACACTAACAGATGTACATATTGATAGATGTAGTGGAGAGTTGCAATTATCTAAACAGGTTGAAGACCAAGAAGAGTTGAACTCCGTGATTTCTTCAACAAGTGCTGTGCTGAGGAAGCTTTTTCTCGAAAAGAGCAATATTTCAGATGATTTTCTTCCAAAATGTCTTGTATTGTTTTTTAATGTCAGATATCTATTCCTATCTGGTAGCAATTTCACCATTCTGCCCGCATGCATTAAAGAATGTCACCATTTGGAGTGGCTTCATCTGAATGAGTGCATTAACTTGAGAGAAATTAGAGGGATTCCGCCAAACATAAAAGAATTATGGGCAAAAAATTGCAAATCATTGAGTTCAGAGTCGAGAAGCAAATTAATGAGTCAGGAATTACATGAGGCTGGAAACAAACTATTTATTGTACCAGGATCATCCATTCCAAAATGGTTTGAATACCGTACCAAGGGATCATCCACTTCCTTTTGGTTTCAGGACAAATGTCCAGCGTTCTCTCTTTGTTATATTTATGTTGCTGATGACCACCCATTGTTCACACTCAGATTATGTGCTGCGGTGGTCATCAATGGTGAAAAGATACAAGAATTCATTGAGATTGGGAAGTGGGGTTCCCTCTATTACTTCAaagatcatatattttttttagatgtTTCAAAATTGATAACTTTCCAACATTATGGAATCGAAGAAGTATATGAGTGGAACAACCAAGTATATCTACAGAGTGATAGATGGAATCATGTGCAGGTTTCTTTCTACCACAAGGTGGATGATGAAATATATGCCTCCAACTTGGTAAAAGAGGTGGGAATAATTGTAAGGAAGCAAGAAAAAAGAAGGGAGGATATCCGATTTACCAATCCTcataaaagaacaaaattattACATGATTTTTATTTGGGTTCAAGCTTTATGGCATCAAACAACTGGACAAGTGGCACTGCCAATGACAAAGGTAACTGA 3429 0.3736 MAETPNSSSNKVKDGSALINSGSTGSGDSNSGFYRRDPLYLHPTDHTGLQLVSISLTPSNYMIWSRFMKIALKSKNKLGFVDGTCPKPTDENSDRFFQWSFADSTVTAWIVNSMSKDLAEAYVFTTSARRLWQTLEDKYGKAAKPQVFHIKKKLAAIKQNGESLAVYSTKLEKYWEELNSLEPKIRCSTEHSSCCHSNKQHDDRDSSNQVMQFLMGLDDCYDTVVNNILMLEPTPSYNKVYAIVATVESKKEVMAETASSTEATALAVKNFEQSKYNSVNRSGSSGNKKDVKKGDRFCTVCNKPGHMEDTCFKKHGIPEWYTEYKAQKSKKTQSFSSNVSTVDSASQSSNGVDMSLFSEMIQKELQKFMKSKASSEEKTVNTSCFADFAGNVHSYSDMVFQNGNWIIDSGASSHISGDLTLFSSLRDVNNSNTVLLPDGTVKKVKHIGEVRINDKILLKEVLYVPDFRYNLISVHRLAESGQMQFMFDGSTCIVQDLLNKEVLAVGIVRKHLYILNKEQVNLLALCNSDSVEHNVYTKVDSCSKSTLSESKIFPDYGFDQNNSLSHHTDAVSSPQVTSATPNSGVDILVESQIVSDSPPPIIPQAESRRPTRVSRKPTWLQDYVTCSMGRADEYTPKAYPFIQPKSCSPDYLHFLSAGTDNIKVIIQKYLSEDIEKLENLSVINLSRSQFITQIPDVSSIPNLTKLNLGCCKNLIEVHESVGHLKKLRILDVQWCVKLTTFPCRIKLPSLEYLGLQHCSSLKKFPEIQEKMECITSLDLSDTNLELPTSICNLVRLHALIADKCSGLQLPSSIAMLPTLTDVHIDRCSGELQLSKQVEDQEELNSVISSTSAVLRKLFLEKSNISDDFLPKCLVLFFNVRYLFLSGSNFTILPACIKECHHLEWLHLNECINLREIRGIPPNIKELWAKNCKSLSSESRSKLMSQELHEAGNKLFIVPGSSIPKWFEYRTKGSSTSFWFQDKCPAFSLCYIYVADDHPLFTLRLCAAVVINGEKIQEFIEIGKWGSLYYFKDHIFFLDVSKLITFQHYGIEEVYEWNNQVYLQSDRWNHVQVSFYHKVDDEIYASNLVKEVGIIVRKQEKRREDIRFTNPHKRTKLLHDFYLGSSFMASNNWTSGTANDKGN 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2697 1142 MobiDBLite consensus disorder prediction 1 30 - -
Sto10g2697 1142 PANTHER NB-ARC DOMAIN PROTEIN 676 996 - -
Sto10g2697 1142 SUPERFAMILY Retrovirus zinc finger-like domains 281 317 IPR036875 GO:0003676|GO:0008270
Sto10g2697 1142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 676 996 IPR044974 GO:0006952
Sto10g2697 1142 Pfam gag-polypeptide of LTR copia-type 42 89 IPR029472 -
Sto10g2697 1142 Pfam C-JID domain 957 1076 IPR045344 -
Sto10g2697 1142 Pfam gag-polypeptide of LTR copia-type 100 185 - -
Sto10g2697 1142 Gene3D Ribonuclease Inhibitor 651 769 IPR032675 -
Sto10g2697 1142 Gene3D Ribonuclease Inhibitor 770 953 IPR032675 -
Sto10g2697 1142 SUPERFAMILY RNI-like 664 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2697 Sto-Chr10 37191983 37198692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2697 677 827 WRKY Transcription Factor Family AT4G12020 37.908 1.09e-13 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2697 - - hbr:110662438 340.502