Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2687 ATGTCATCATCATCAACCCCTCAAGTTATCACCTGCAAAGCTGCTGTGGCATGGGGAGCTGGAGAGCCTTTGGTAATGGAGGAAGTTGAAGTGAGCCCTCCCCATCACTCCGAGATCAGGATTCAAGTTGTCTCCACCTCTCTTTGTCGTAGCGATCTTGTCGCTTGGGAATCCCAAACCATATTTCCTCGTGTATTCGGCCATGAAGCATCAGGGATTGTTGAGAGTGTTGGCGAGGGAGTAACTGAATTCAAGGAGGGGGACCATGTGCTAGCAGTCTTCATTGGAGAATGCATGACATGCAGGCTGTGCAAATCTGGAAAAACTAACATATGTCAAGCTTTGGGATTGGAAAGAAAAGGCGTAATGCATAGTGATCAGAAGACGCGCTTTTCAATAAAAGGGAAGCCTGTTTATCACTATTGTGCTGTTTCAAGTTTCAGTGAATATACAGTTGTGCATTCTGGATGTGCAGTCAAAGTCAGCCCAAATGCTCCTCTTGAGAGAATATGCCTTTTGAGCTGTGGGGTCGCCGCAGGTCTCGGTGCTGCATGGAATGTTGCTGATGTATCAGAAGGATCAACAGTGGTGATATTTGGTCTAGGAACTGTTGGCCTTTCTGTTGCTCAAGGTGCCAAAGTTAGGGGTGCATCTCGAATAATTGGTGTAGACAGCAATCCTCAGAAGTGTGAAAAAGCTAAAGCTTTTGGAATTACTGAAGTTGTTAACCCGAATTCCTGCGAAGAACCTATTGCTCAGGTTATTAAGCGCATTACCGATGGTGGAGCAGATTTCTCATTTGAATGCATAGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTTACCCTTGGAGTGCCAAAAGTGAAGCCTGAAATGTCGGCTCATTATGGACTATTACTAATGGGAAGAACTTTGAAAGGATCTCTATATGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTAGTAGAGAAGTATGTTAATAAGGAAATCAAGATCGACGATTACGTAACACATGATTTGCCATTTGATGACATCAACAAAGCTTTTAATCTCATGAGAGAAGGAAAGTGTCTGCGTTGTGTTATCCACATGCCCAGGTAA 1134 0.44 MSSSSTPQVITCKAAVAWGAGEPLVMEEVEVSPPHHSEIRIQVVSTSLCRSDLVAWESQTIFPRVFGHEASGIVESVGEGVTEFKEGDHVLAVFIGECMTCRLCKSGKTNICQALGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPNAPLERICLLSCGVAAGLGAAWNVADVSEGSTVVIFGLGTVGLSVAQGAKVRGASRIIGVDSNPQKCEKAKAFGITEVVNPNSCEEPIAQVIKRITDGGADFSFECIGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLYGGWKPKSDLPSLVEKYVNKEIKIDDYVTHDLPFDDINKAFNLMREGKCLRCVIHMPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2687 377 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 6 375 - -
Sto10g2687 377 Pfam Zinc-binding dehydrogenase 204 325 IPR013149 -
Sto10g2687 377 PANTHER ALCOHOL DEHYDROGENASE 6 375 - -
Sto10g2687 377 SUPERFAMILY GroES-like 6 185 IPR011032 -
Sto10g2687 377 Pfam Alcohol dehydrogenase GroES-like domain 37 160 IPR013154 -
Sto10g2687 377 SUPERFAMILY GroES-like 326 374 IPR011032 -
Sto10g2687 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 339 IPR036291 -
Sto10g2687 377 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Sto10g2687 377 CDD alcohol_DH_plants 10 374 - -
Sto10g2687 377 Gene3D - 15 370 - -
Sto10g2687 377 Gene3D - 180 318 - -
Sto10g2687 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2687 Sto-Chr10 37125492 37130692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2687 38 176 Monolignol Biosynthesis Gene Families AT1G72680 26.573 5.63e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2687 K00001 - gmx:100819938 684.485