Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2653 ATGGCAACTAGAATTCAGTTTGAAAATTCTTGTGAAGTCGGGGTATTTTCAAAACTCACCAATGCCTACTGTTTGGTAGCCATCGGAGGTTCTGAAAACTTCTATagTGCATTTGAGGCTGAGTTAGCTGATGTTATCCCTGTGGTGAAGACATCCATTGGTGGTACTCGTATTATTGGCCGCCTTTGTGCTGGAAACAAGAAAGGGCTTCTCTTGCCCCATACCACTACAGACCAAGAACTTCAACATTTGAGAAACAGTCTGCCTGATCAAGTTGTTATTAAGCGAATAGAAGAAAGGTTATCTGCTCTGGGTAATTGTATAGCATGCAATGACCATGTGGCCCTCACGCATACTGATCTTGATAAGGAGACTGAGGAGATGATCGCAGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACCATTGCTGGTAATATTCTTGTGGGTAGTTACTGTGCTTTCTCCAATAGAGGGGGTTTGGTCCACCCTCATACTTCCATTGAAGACTTGGATGAGCTCTCCACCCTTCTTCAGGTTCCACTGGTGGCCGGCACCGTGAATCGTGGTAGCGAAGTAATAGCTGCCGGCATGACGGTTAATGATTGGACAGCTTTCTGTGGTTCGGACACCACAGCAACTGAAGTCTCTGTGATTGAGAGCGTTTTCAAGCTGAGGGAAGCTCAACCCAGTGCCGTTGTGGATGAGATGAGGAAATCCCTTGTTGATAGCTATGTCTGA 738 0.4553 MATRIQFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELADVIPVVKTSIGGTRIIGRLCAGNKKGLLLPHTTTDQELQHLRNSLPDQVVIKRIEERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATEVSVIESVFKLREAQPSAVVDEMRKSLVDSYV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2653 245 SUPERFAMILY Pentein 1 224 - -
Sto10g2653 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Sto10g2653 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
Sto10g2653 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Sto10g2653 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Sto10g2653 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Sto10g2653 245 Gene3D - 1 225 - -
Sto10g2653 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Sto10g2653 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Sto10g2653 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2653 Sto-Chr10 36796521 36799512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2653 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 89.796 2.91e-172 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2653 K03264 - jre:108979950 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2653 10 36796521 36799512 Sto8g2875 8 21000344 21005078 CCT