Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2641 ATGGACGGTAGCAATTTTCACCAAAGGGATCATAAAAAGCCAAGCCCTTCTTCTTCCATTGAGGAGCTTAAGGCAGAGAAGAAGCTAATAATAACTTACAAGTACAAGGAATGCCTCAAGAACCATGCAGCTTCAATAGGTGGAAATGCAACTGATGGGTGTGGAGAGTTCATTTCTTCTTCAGCAGCAGAAGAAGGCACACCTGAGGCCTTCAAGTGCTCAGCCTGCAATTGCCACAGAAACTTTCACAGGAAAGAGACACAATATTATTACTCAAATTCTGATCAATACTATCTCAGTACTCCAATGCTTCCAAGTAACTTGGACCGTTTTTCTCCAAACAAAAGCGGGTCACATCTTTTTGATCAGTTCGATGATCCGGGGAATTATAATAAGGATATTGAGGATGAAGATGATCATGGGTTTCATTTTGAAGACGCGGAAAAGCCACGTgataagaagatgaaaaagaggTTTAGGACAAAGTTTAGTGTAGAACAGAAGGAGAAGATGGTGAGGTTTGCTGAGAAGGCAGGGTGGAAGATGCAGAAAATAGAGGAATCATTAGTGCAGCAGCTTTGCCAAGAGATAGGAATCAATAGAAGAGCAAGCATTGTTTTACTATGCATACCTAAGGCTCAAATTTGTCTTCATTTGAGGATTTCTGCATCAGAaagTCAAGCAGAGCCTAGAGAATACTTCACAAAAAAAGGGTCTGTAAATGGAGAACTTCAATCCATCCAAGGTGTATTTCAGCTTCCCAAAACCTTCGTTCTGCATGACAGCAAGGATATTAAAGGGGACAATAATAGAGTCGTTTGA 822 0.3978 MDGSNFHQRDHKKPSPSSSIEELKAEKKLIITYKYKECLKNHAASIGGNATDGCGEFISSSAAEEGTPEAFKCSACNCHRNFHRKETQYYYSNSDQYYLSTPMLPSNLDRFSPNKSGSHLFDQFDDPGNYNKDIEDEDDHGFHFEDAEKPRDKKMKKRFRTKFSVEQKEKMVRFAEKAGWKMQKIEESLVQQLCQEIGINRRASIVLLCIPKAQICLHLRISASESQAEPREYFTKKGSVNGELQSIQGVFQLPKTFVLHDSKDIKGDNNRVV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2641 273 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 156 202 IPR006455 -
Sto10g2641 273 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 16 203 - -
Sto10g2641 273 Pfam ZF-HD protein dimerisation region 33 87 IPR006456 -
Sto10g2641 273 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 16 203 - -
Sto10g2641 273 MobiDBLite consensus disorder prediction 1 21 - -
Sto10g2641 273 SUPERFAMILY Homeodomain-like 151 202 IPR009057 -
Sto10g2641 273 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 34 86 IPR006456 -
Sto10g2641 273 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 35 86 IPR006456 -
Sto10g2641 273 Gene3D - 143 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2641 Sto-Chr10 36688444 36691036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2641 20 208 ZF-HD Transcription Factor Family AT2G02540 45.854 3.76e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Sto10g2641 ZF-HD_dimer 8.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2641 - - gmx:100793926 184.496