Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2636 ATGCTACTGTCAAGTTGCTCTTCAGGCTGTAAATGTGGGAGTTCCTGTCTCAACAAACCATTCCAGAATCGACCTgtgaaaaaattgaaattggttAAGACTGAGAAGTGCGGTTCTGGAATTGTGGCGGATGAAGATATTGAGCAAGGAGAGTTTGTCATTGAATATGTAGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACATCGGGGGGAGACTAACTTCTACTTATGTGAGATCAATCGAGATATGGTTATTGATGCAACATATAAGGGAAACAAATCAAGATATATCAACCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACCCGTGACATTAGAAAGGGCGAGCATCTGACATATGATTACCAGTTTGTCCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGATAGGTGCAGGCGTAAGCTGGGGGTTCGACCAACCAAGCCTAAAATGTCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTGGCGTCATCTTCTCAAAAATAG 582 0.4003 MLLSSCSSGCKCGSSCLNKPFQNRPVKKLKLVKTEKCGSGIVADEDIEQGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGADRCRRKLGVRPTKPKMSSDAALKLVAYQVASSSQK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2636 193 Gene3D SET domain 1 182 IPR046341 -
Sto10g2636 193 ProSiteProfiles AWS domain profile. 1 25 IPR006560 GO:0005634|GO:0018024
Sto10g2636 193 ProSiteProfiles SET domain profile. 27 144 IPR001214 GO:0005515
Sto10g2636 193 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 193 - -
Sto10g2636 193 SMART set_7 27 150 IPR001214 GO:0005515
Sto10g2636 193 Pfam SET domain 38 143 IPR001214 GO:0005515
Sto10g2636 193 PANTHER SET DOMAIN PROTEINS 1 193 - -
Sto10g2636 193 SMART PostSET_3 150 166 IPR003616 -
Sto10g2636 193 SUPERFAMILY SET domain 3 162 IPR046341 -
Sto10g2636 193 CDD SET_ASHR3-like 28 166 - -
Sto10g2636 193 ProSiteProfiles Post-SET domain profile. 150 166 IPR003616 -
Sto10g2636 193 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 5 187 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2636 Sto-Chr10 36654325 36655927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2636 6 165 C2H2 Transcription Factor Family AT2G23740 36.111 4.90e-25 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto10g2636 SET 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2636 - - qsu:112002855 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2636 10 36654325 36655927 Sto10g2636 10 36654325 36655927 ECH