Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2603 ATGGCTTCTCTGGCAACATCCGCCGCCGCCGCGGCCATTACCAAGTCGGAGATGCTCGGAAACCCCGTCAACATCACCGGTGCCGCCCGGCCAGCACCGTCGCCGTCTAGCTCCGCCACCTTCAAGACCGTCGCTCTCTTTGGCAGGAACAAAGCGGCGCCACCGCCACCGGCGAAGAAGAAGGCTGCCGCCGCCGTCGCTCCGGCCAATGACGAGCTCGCCAAGTGGTACGGTCCTGACAGGAGGATCTTCTTGCCGGAGGGTCTCCTCGACCGATCCGAGATCCCGGAGTACTTGAACGGAGAAGTCCCCGGAGACTATGGTTATGACCCATTTGGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATATGAATTGATTCATGCAAGATGGGCAATGCTTGGAGCTGCTGGATTCATCATTCCTGAGGCTTTCAACAAATTTGGAGCCAACTGTGGTCCTGAGGCtgtttggtttaagACAGGAGCTCTGCTTCTTGATGGGAACACATTGAACTACTTTGGAAAGCCCATTCCCATCAATCTCATTGTTGCTGTCATTGCTGAGGTTGTTCTTGTGGGTGGTGCAGAGTACTACAGAATCATTAATGGCCTGGATTTGGAGGACAAGCTTCACCCAGGAGGTCCATTTGACCCATTAGGTCTTGCAAAGGATCCAGACCAGGCTGCACTCCTAAAGGTGAAGGAGATAAAGAATGGAAGGCTAGCCATGTTTGCCATGCTTGGATTCTACTTCCAAGCTTATGTCACAGGAGAAGGTCCAGTTGAGAATCTTGCAAAGCATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTCATTGCTGGTTCTGCTGAGAGGGCTCCCACTCTGGCATCACTGCTTAGCTACTCAGTTCACCTCTTACCACCGTTTCCAACCTCCACCCGTCGAGTCACGCACCATAGCAGCACCACCCACGTGACACTGTGCACTGTTCGAGAACACTGTACCGATGACCTGCAATCCAACGTATCCATCACACCACGTCCATTACCGCCACTTCTCCCTTCTCCGAGTCCCtatataaaccctaacccagCAAGGCCTAAGACACGACTTTACTGCCCACTTTGTAAAGGACTCACCAATAATCTGGTTTTTGAAGCATCTATGAGGCTTATTAGTTTGAATGTTAATCATCCTAATTTACCAAATGTGTGA 1212 0.505 MASLATSAAAAAITKSEMLGNPVNITGAARPAPSPSSSATFKTVALFGRNKAAPPPPAKKKAAAAVAPANDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKPIPINLIVAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTLASLLSYSVHLLPPFPTSTRRVTHHSSTTHVTLCTVREHCTDDLQSNVSITPRPLPPLLPSPSPYINPNPARPKTRLYCPLCKGLTNNLVFEASMRLISLNVNHPNLPNV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2603 403 Pfam Chlorophyll A-B binding protein 96 257 IPR022796 -
Sto10g2603 403 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 294 - -
Sto10g2603 403 SUPERFAMILY Chlorophyll a-b binding protein 75 285 - -
Sto10g2603 403 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 294 IPR001344 GO:0009765|GO:0016020
Sto10g2603 403 Gene3D Chlorophyll a/b binding protein domain 83 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2603 Sto-Chr10 36319542 36322877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2603 11 294 Chloroplast and Mitochondria Gene Families AT4G10340 80.000 4.84e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2603 K08916 - cpap:110818730 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2603 10 36319542 36322877 Sto10g2603 10 36319542 36322877 ECH