Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2602 TTGAACCCTAAATGGGTATGTGGGAAGAACACAGAGCTAAGAGCCCTTATGGAAATGAAGTCAAGTTTGGACCCAGAAAGTCTCTACCTTTCCTCTTGGACCATCAATGGAAACCCATGTGGTGGTAGTGACTCGTTTGAGGGAGTGGCTTGCAATGAGAAAGGTCAAGTGGCTAACATTTCCTTGCAGGGAAAGGGTCTCTCTGGGAAGCTCTCACCCGCCATTGGAGAGCTCAAGCACCTTACAGGACTCTACTTGCATTATAACTCCTTGTACGGCCCTATACCCAGAGAAATTGCAAACTTGACTAACCTCACTGACTTGTATTTAAATGTGAATCATCTTTCTGGAGAAATCCCTTCTGAGATAGGCAAAATGGAGAACTTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCTACACAGCTTGGTGGATTGAAGCAGCTTGTGGTTCTTGCACTGCAATCTAATCAACTAACTGGTGCTATCCCTGCTAGTTTAGGTGATTTGGGAATGCTCATGAGGCTCGATTTGAGCTCGAATCGCCTCTTCGGTTCGATTCCAACTAGATTAGCCGAGGCGCCTTCGCTTCGAGTTCTAGATGTTCACAACAACACCCTCTCTGGAAATGTGCCTCCAGCTTTGAAGAGACTAGATGATGGCTTTTTGTATGAGTACAATCTGGGATTGTGTGGAGTTGGGTTTTCATCCTTGAAAACTTGCAATGCTTCAGATCGTGTCAATCCTGATAAGCCTTATGGAGCCGGTTTAGACGGTACATCAACAAGAGATATACCTGAAACTGCGAATGTACAGTTGCCTTGCAATGGAACTCAGTGCCAAAATCCATCAAAATCGAAACAATCAGCATCTATCATTGTTGGCATAGTAGTGTTTGCCATTGCCGTGCCAACTATCGGTGTTCTAACTTTCACGCAGTATCGTAGGCGAAAACAAAAGCTTGGAAGCTCCTTTACTATCTCAGATAATCATCTAATTACGTCTGACCATGGAAAGGGTACATACCGAAAAAACGGATCTCCTTTGGTCAGCCTTGAGTACTCTAGTGGATGGGACCCTTTAGCCGAGAGCCGGAATTTCAATGGGGGTAACCATGATGATATGTTCCATAGTTTCAGGTTCAACTTGGAAGAGGTAGAGACGGCTACTCAGTATTTCTCGGAGTCGAACTTGTTGGGTAAGAGCAACTTTAGTGCAACATACAAAGGATTGTTAAGAGATGGATCAATTGTTGCTGTCAAAAGCATCAGTAAAACTAGTTGTAAGTCTGATGAATCTGAGTTTATAAAGGGACTGAACATTTTGACCTCACTTAGGAATGAGAACTTAGTGAGGTTGAGAGGCTTTTGTTGCTCGAGGGGACGAGGCGAGTGCTTTCTGGTATATGATTTTGTTCCTAATGGAAGTCTTTCGCGCTTCCTCGATGTGAAGGAAGGCGAAGGGGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGAATTGCTAAAGGAATAGCATATTTACATACATACAAAGCGAACAAGCCGGCGCTTGTTCACCAAAACATCTCGGCCGAAAAAGTCCTCATTGATAAGCGATTCAACCCGATGCTTTCGGATTCCGGCCTCTACAAGCTTCTCACCAATGACATTGTCTTCTCAGCACTCAAGGCGAGTGCAGCCAAGGGTTATCTGGCTCCTGAATACACCACCACCGGCCGGTTCACGGAGAAAAGCGATGTGTATGCTTTCGGGGTGCTGCTCTTCCAGATCCTCTCAGGGCAACGAAAGATCACAAGCTCGATGCGCCTGGTGGCAGAAGCCTCGAGATTCCAAGAGCTCGTTGACCCTAATCTCCACGGAAGATTCTTCGAGTATGAGGCTGCTAAGCTCGCGAAAATGGCCTTGCTTTGCACCCATGAGTGTCCTTTTGAGAGGCCAATGATGGAAGCCATTGTTCAAGAACTTGGCAATTTTAGCAGCTGTATTTGA 2010 0.4527 LNPKWVCGKNTELRALMEMKSSLDPESLYLSSWTINGNPCGGSDSFEGVACNEKGQVANISLQGKGLSGKLSPAIGELKHLTGLYLHYNSLYGPIPREIANLTNLTDLYLNVNHLSGEIPSEIGKMENLQVLQLCYNQLTGSIPTQLGGLKQLVVLALQSNQLTGAIPASLGDLGMLMRLDLSSNRLFGSIPTRLAEAPSLRVLDVHNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKTCNASDRVNPDKPYGAGLDGTSTRDIPETANVQLPCNGTQCQNPSKSKQSASIIVGIVVFAIAVPTIGVLTFTQYRRRKQKLGSSFTISDNHLITSDHGKGTYRKNGSPLVSLEYSSGWDPLAESRNFNGGNHDDMFHSFRFNLEEVETATQYFSESNLLGKSNFSATYKGLLRDGSIVAVKSISKTSCKSDESEFIKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGSLSRFLDVKEGEGEVLEWSTRVSIVKGIAKGIAYLHTYKANKPALVHQNISAEKVLIDKRFNPMLSDSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGQRKITSSMRLVAEASRFQELVDPNLHGRFFEYEAAKLAKMALLCTHECPFERPMMEAIVQELGNFSSCI 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2602 669 Pfam Leucine rich repeat N-terminal domain 10 52 IPR013210 -
Sto10g2602 669 Pfam Protein tyrosine and serine/threonine kinase 401 662 IPR001245 GO:0004672|GO:0006468
Sto10g2602 669 Gene3D Phosphorylase Kinase; domain 1 369 475 - -
Sto10g2602 669 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 666 - -
Sto10g2602 669 ProSiteProfiles Protein kinase domain profile. 397 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2602 669 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 9 666 - -
Sto10g2602 669 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Sto10g2602 669 Gene3D Ribonuclease Inhibitor 8 161 IPR032675 -
Sto10g2602 669 SUPERFAMILY Protein kinase-like (PK-like) 380 662 IPR011009 -
Sto10g2602 669 Gene3D Ribonuclease Inhibitor 162 226 IPR032675 -
Sto10g2602 669 Gene3D Transferase(Phosphotransferase) domain 1 476 668 - -
Sto10g2602 669 SUPERFAMILY L domain-like 11 220 - -
Sto10g2602 669 CDD STKc_IRAK 403 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2602 Sto-Chr10 36300811 36303632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2602 10 510 Miscellaneous Gene Families AT4G22730 54.990 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Sto10g2602 PK_Tyr_Ser-Thr 6.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2602 - - gmx:100789253 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2602 10 36300811 36303632 Sto8g2930 8 21563383 21568832 CCT