Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2596 TTGCGCCATTGTGAAGGGTTTAAGGAGCTGCGTATTCTTGCGTCGTACACTGGAATCCTGAACGTTCTTGAGCATTTGACAGAATCGATGGGATTCTGGGGGATTGAACTGAAGCCCGGAAAACCCTATCCTTATCATGCGGATAACGTGCAAGGGAGGCTTCATATAACTCAGGCAACGTTAGGCCTTGGCTCATCGACAGAGAGAAGCATTCTTCAATGCTCTTCTGGACGCAAAAATCCAGTCTTCTTATGTTCGTTGCtgccaaataaaattgactcatGCCCCTTGAATCTTGAGTTTGGCGAAGATGATTTAGTGGCCTTCTCGGTGATTGGTCCACGAAGTATCCATCTCTCTGGTTATTTTGTGGCTACTGATGGGGATGACCTTAGGGATGACTATGAATATGACTCTTTTGGAGAGGATATTGGAGACAGTGAGACGGATGAGTCTTCTGAATATGACACTGAAGATGAATATGCTGATGGCTTTATTGATGATAGTGATGCTGACATTTATCCACTTTCACGTGTCCCAAATAGTGGAGTTGTAATCGAGGAAATTGTGGATGATGATAAACCTGAAAGTGGAGATGCTTCTTctaagaagttgaagaaaaaGGATCAAATGGCTAACAGCAAAAATTCTCAGCTTCAAGTTGTTAGAGGTGATAAGCGTGTCCCTGTTCTGGAaagtgaagatgaagatggtTTTCCAATTTCTACATCAGATAAAGGCGAATCTGATTCTCAGAAGGCTGAAGAAGAAGTGAAAGAACTGAAACATAAGAAAACTGAGAAAGCCaataaaaagaaagtaaaagatGATGATCATGCTGCCACCTTAAAACGAAAAGTTGAAGGTGCTGATGGAGATGAGAAAATTGAGCATCCAGAAGGgaagaagaagaaaaagaggttGAAGGAACAAGGTAAAGGGGAAATTGCTCAAGTATCTGGTAATAGTAATGAGCCTAATGCTGCAAGAACCGAAGAACAACATCCTAAGGAGGTGAAAAGAACGCCCAGCTTGAACAATGTTTCTCATGCAGAGGATGAACTTGAAGGAAATCTGTCCAATGAAAAGGTCCTTGATgagaagaaaaacaagaaaaagaagaaaaaggccAAGGATAAAGGGGTAACTAGTGCAAATCAAACTCCTACAACATCAGGAAATCAGAATTCCACTTTGGAGGGAGGAGATGAAGAAATGGATGCCAGGCCATCTCAAATGAGAACATTCGCAAATGGATTGGTTATCGAGGAACTATCCATGGGTAAACCAGATGGCAAAAAAGCTGCTCCTGGAAAACAGGTCAGTGTTAAATACATTGGCAAGCTACAGAAAAATGGGAAAATTTTTGACTCGAATGTTGGTAGAGCTCCCTTTAAATTTCGCCTTGGTGTAGGACAAGTCATAAAGGGTTGGGACGTTGGAGTAAATGGTATGAGGATTGGGGACAAAAGAAGAATCACAATTCCACCATCTATGGGTTATGGAGATAAACGTGCTGGGCCCATTCCACCAAATTCGTGGCTTGTATTTGATGTTGAGTTGGTTGAGGTTCGCTGA 1578 0.3923 LRHCEGFKELRILASYTGILNVLEHLTESMGFWGIELKPGKPYPYHADNVQGRLHITQATLGLGSSTERSILQCSSGRKNPVFLCSLLPNKIDSCPLNLEFGEDDLVAFSVIGPRSIHLSGYFVATDGDDLRDDYEYDSFGEDIGDSETDESSEYDTEDEYADGFIDDSDADIYPLSRVPNSGVVIEEIVDDDKPESGDASSKKLKKKDQMANSKNSQLQVVRGDKRVPVLESEDEDGFPISTSDKGESDSQKAEEEVKELKHKKTEKANKKKVKDDDHAATLKRKVEGADGDEKIEHPEGKKKKKRLKEQGKGEIAQVSGNSNEPNAARTEEQHPKEVKRTPSLNNVSHAEDELEGNLSNEKVLDEKKNKKKKKKAKDKGVTSANQTPTTSGNQNSTLEGGDEEMDARPSQMRTFANGLVIEELSMGKPDGKKAAPGKQVSVKYIGKLQKNGKIFDSNVGRAPFKFRLGVGQVIKGWDVGVNGMRIGDKRRITIPPSMGYGDKRAGPIPPNSWLVFDVELVEVR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2596 525 Gene3D Nucleoplasmin core domain 27 129 - -
Sto10g2596 525 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 438 525 IPR001179 GO:0003755
Sto10g2596 525 MobiDBLite consensus disorder prediction 135 158 - -
Sto10g2596 525 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 433 522 IPR001179 GO:0003755
Sto10g2596 525 MobiDBLite consensus disorder prediction 187 408 - -
Sto10g2596 525 MobiDBLite consensus disorder prediction 187 211 - -
Sto10g2596 525 MobiDBLite consensus disorder prediction 382 401 - -
Sto10g2596 525 SUPERFAMILY FKBP-like 412 525 - -
Sto10g2596 525 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 296 525 - -
Sto10g2596 525 PANTHER PEPTIDYLPROLYL ISOMERASE 296 525 - -
Sto10g2596 525 Pfam Nucleoplasmin-like domain 32 124 IPR041232 -
Sto10g2596 525 PANTHER PEPTIDYLPROLYL ISOMERASE 30 278 - -
Sto10g2596 525 PIRSF FK506-bp_FPR3 27 83 IPR023566 GO:0003755
Sto10g2596 525 PIRSF FK506-bp_FPR3 76 342 IPR023566 GO:0003755
Sto10g2596 525 PIRSF FK506-bp_FPR3 242 525 IPR023566 GO:0003755
Sto10g2596 525 MobiDBLite consensus disorder prediction 227 304 - -
Sto10g2596 525 Gene3D - 411 525 IPR046357 GO:0003755
Sto10g2596 525 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 30 278 - -
Sto10g2596 525 Coils Coil 244 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2596 Sto-Chr10 36238789 36245066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2596 438 525 Calmodulin-binding Proteins AT5G48570 50.000 3.30e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2596 K14826 - gmx:100792856 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2596 10 36238789 36245066 Sto10g2596 10 36238789 36245066 ECH