Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2595 ATGTGGTGTGTGGAGTGTGTGGACTACTATCTACCTCCTCTGAtctgggttttggatttgatttaTAGCTTTATACCTGAGTTTAAGGTGGTATATGTGGACCCTGTGGTTAGATTCCCTTTCAGATCTGGAATAGAAGTTCTGATGCGGAAAGGGATATTTTGTGGGTGGCATAATCTGACCACAGAGAAGGAGTCTAGAATAATTGATGTGACCATGCTTGAACTGGTCGCGTGGGTCATGTTGGCCTTGTTTGTGACCTGTCAAGAatcaaaagctaagagaattgCCAGCAAGTATGGGAAATTTGATTGTgactttaaaagttttatactCAACTTACAACTTTCTATTCTCTGGCTTTCTATCTCCTGTACAGCTAATGGAATTGCATACTTTGTTGGTGCAAATTTCACTCCTCATATTCTCACGGTCAATGCTGGCGAGGATGTTACTATGAAGGTTATGTCCTTCTCTCAACAAGGATCCCGTGCTATTTGCATTCTTTCTGCAAATGGCATGATTTCAAATGTAACGCTTCGTCAACCAACTTCCTCTGGGGGTACTTTAACATATGAGGGACGGTTTGAGATTCTTTCCTTGTCTGGTTCATATATGCCAACTGAGAATGGAATTACAAGGAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCAGATGGTCGAGTGGTTGGGGGTGGACTTGCTGGTCTGTTGATTGCTGCAGGCCCTGTTCAGGTTGTCGTGGGCAGTTTCCTTCCAGGTCACCAGCAGGAGCACAAACCCAAGAAGCAGAACAAAGAGTACAtatcaaccataaaccctacccACCATTTTAACCCTATGTCTGATCAAGAAATACATGTTAGTTTTGGAGGTGTAAAGCCTATTATGACACCAGCTGCTCTTCAAGGAGACAACAATATTGCTTTTAACAATGTTCAAGTATCTAGGGACTCATCCACTGATAGAGAGTCTAACCCCAGCCAATCAAATGCTGGGGTTTCATGCTAA 1017 0.4051 MWCVECVDYYLPPLIWVLDLIYSFIPEFKVVYVDPVVRFPFRSGIEVLMRKGIFCGWHNLTTEKESRIIDVTMLELVAWVMLALFVTCQESKAKRIASKYGKFDCDFKSFILNLQLSILWLSISCTANGIAYFVGANFTPHILTVNAGEDVTMKVMSFSQQGSRAICILSANGMISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPTENGITRSRSGGMSVSLAGPDGRVVGGGLAGLLIAAGPVQVVVGSFLPGHQQEHKPKKQNKEYISTINPTHHFNPMSDQEIHVSFGGVKPIMTPAALQGDNNIAFNNVQVSRDSSTDRESNPSQSNAGVSC 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2595 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 126 327 - -
Sto10g2595 338 MobiDBLite consensus disorder prediction 318 338 - -
Sto10g2595 338 Gene3D - 140 279 - -
Sto10g2595 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 261 - -
Sto10g2595 338 CDD DUF296 139 253 IPR005175 -
Sto10g2595 338 ProSiteProfiles PPC domain profile profile. 135 277 IPR005175 -
Sto10g2595 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 126 327 IPR039605 GO:0003680
Sto10g2595 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 253 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2595 Sto-Chr10 36233589 36237608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2595 134 271 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 76.978 5.72e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2595 - - gmx:100789179 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2595 10 36233589 36237608 Sto8g2966 8 21921411 21927229 CCT
Sto10g2595 10 36233589 36237608 Sto8g2966 8 21921411 21927229 ECH
Sto10g2595 10 36233589 36237608 Sto10g2595 10 36233589 36237608 ECH