Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2551 ATGCCTGTTATGACGTACCGCATTAATCTTCCACTTGGCTgcctcttcttcttcgtcttcctTCTTTGCTATTCTCTCGTCGTGACCGGCATtgggagagaagaagagaacccAGAGAGGAATCATCTCCTTTCTTTCAAAACCAGTCTCGAAAACCCCCATCTTCTCGCTTCATGGAATTCCTCAAACCCTCATTGCGAATGGGTCGGCGTTACTTGTGTACTCGACCGAGTCACCTCGCTCTCTCTTCCATCTCGCTCTCTCAAAGGCCCTCTCTCTGCTTCATCACTCTTCTCCCTTACTAGCCTCACCGTTCTTAACCTCTCCTCCAATGCTCTGTTCGGTGAAGTTCCTCCGCGTATTTCCAATCTGAGAAACTTGAAGGAGCTCAACCTTAGAGATAATCATCTCTCCGGCGAAATTCCGCACGAGCTCGGTGCTCTGATTCGGCTCAGAACTCTCAAACTCGGCTTCAACTCGCTCGCCGGAGAAATCCCGCCGGAACTGGGGTCCCTCACGCAGCTCCAGACTCTCGAACTCTCCGACAATGCCCTCGCCGGAGCGGTGCCGGAGAGCATCGGGAATCTCACACAGCTTCAGTTCCTTGACCTCAGCAACAATCTTCTCTCAGGTTCTCTCCCTTTGACTCTGTTCACGAAAACTCTGTCTCTGATTTCTCTGGACGTTTCGAACAACTCCTTTTCCGGTACACTACCGCCGGAAATCGGTAATTTGAGGAATATTACTGCGTTTTACAGTAGCAGTAATAAGTTTACCGGTAGGTTGCCTTCTGAGATTGGTGAGCTTTCTCGGCTTCAAGTGTTGTATGCACCTTCATGTTTCATAGAAGGACCATTGCCTGAAGAAATGTCAAAACTGAAGTCATTGAGTAAACTTGACCTTTCTTACAACCCCTTGAAGTGTTCGATCCCAAAGTTCATTGGGGAGATGAAGAGTTTGAAAATACTGAACCTTGCTTATGCTCAGCTCAATGGGTCCATACCATCTGAGCTTGGGAGGTGTAGGGATTTGGGGTCTGTGATGCTTTCATTTAACTCTCTTTCTGGGTCATTACCGGAGGAGCTTTCTCAGCTTCCCATGATGACATTTATAGCTGAGAAGAATCAGTTTCATGGGAATTTGCCTGCTTGGCTTGGAAAGTGGAATCATATTGATACTCTTTTGCTTTCTGAGAATCTATTTTCTGGCAAAATTCCTCCTGAGCTTGGGAATTGTTCTTCAATGGAGCATCTCAGTTTGAGTAGTAATTTGTTGACAGGTCCCATACCTGAGGAGCTATGTTATGCAGCTTCACTCTTGGAGATTAATCTTGATGATAACTTTCTTTCTGGTACAATTGAGAAAGCATTTGTTGAGTGTAAGAATCTCACTCAGTTAGCTTTGATGAACAATCAGTTTTTTGGTTCTATACCACAGTATCTTTCAGAGCTTCCTTTGATGGTGCTTGACCTTGATTCAAACAATTTTAGTGCAAACATACCTTCAAATCTGTGGAATTCTTCCACTTTAATGGAATTTTCTGCTGCTAATAACCGATTAGAGGGCTCTCTTCCGGCGGAGATTGGGAATGCAGGTATTCTACAGAGGCTTGTTCTTAGTAACAATCTACTAAGGGGTACTATACCTAAGGAAATTGGAAGTCTCACAAGCCTCTCAGTTCTTAATTTGAATGGAAATCTGCTTGAAGGGAATATTCCAGCTGATATTGGAGATTGCATTTCTCTGACAAATTTGGATCTTGGAAGTAATCAACTAAATGGGTCTATTCCTGATAAATTGGTTGACCTAAGCCAATTACAATGTCTAGTTCTTTCTCATAATAACTTGTCTGGGTCTATTCCTGCAAAATCATCTTCATATTTTGGACAACTTACCATCCCTGATTTGAGCTTTGTTCAACACCTTGGAGTATTTGATTTGTCTTACAATAGATTGTCTGGGGATATACCTGATGAATTGGGTAGTTGTGTGGTGATTGTGGATCTTAGGATCAGCAACAACATGCTTTCTGGGAGCATCCCACGTTCGCTGTCTCGCCTGACAAATCTCTTAACTCTGGATTTGTCTAGTAACTTGTTGTCAGGCTCCATTCCACCAGAACTTGGAGATTCCCTCAAGCTACAAGGATTATATCTGGGACATAATCAACTCACAGGTACCATCCCTGGAAGTTTTGGGAAAGCGATTACTATGGTGAAGCTGAATTTGACAGGAAACAAGTTGTCTGGTCCAATTCCACATAGTTTTGGGAACATGAAAGAGTTGACTCACTTGGATTTGAGCTCAAATGAGCTTAGTGGCCAGCTTCCATCCTCTCTATCAGGTGTGCAAAGTCTCGTTGGGCTTTACGTGCAGAAGAATAGGCTTTCTGGCGAAGTAGGAGAGCTCTTCTCCAACTCTATGTCATGGAGGATTGAGACAATGAACTTAAGTAATAATTACTTCAATGGTGATTTGCCAAGATCATTGGGAAACTTGTCGTATTTAACAAATTTGGATCTTCATGGAAACATCTTTGTGGGAGAGATTCCTTCAGAACTTGGGAATTTAGTGCAACTAGAGTATGTTGATGTTTCTGGAAACAAGTTAAATGGAATAATTCCTGAGAAAATTTGCTGCCTACTAAATCTGAAGTATCTTGATTTGTCTCAAAACAAATTGGAAGGACCAATACCCAGAAGTGGTATTTGCCAGAACCTATCCAGAGTCATATTTACAGGAAACAAGAATCTATGTGGGTGGATGTTGGGTACAGATTGTCCTGCAAAAAACATTGACAGATTTGCATTGTTTAATAATGCATGGCAACTTGCTGCAATTGCTGTCACAATCATACTAATGACTCTAAGCATTGCTTTTGTTCTACACAGATGGATTAGCAGCAGGAGGCAAAATGATCCAGAAGAACTTGATCAGGAACACAAACTAAACAACTACGTGGATCGAAATCTATACTTCTTGAGCAGTAGCAGCAGATCAAAGGAACCACTGAGCATAAATGTAGCAATGTTTGAGCAGCCTCTTCTGAAACTAACACTGGTGGATATTCTTGAAGCTACCGGCAACTTCAGCAGGACAAACATAATTGGAGATGGAGGTTTCGGGACCGTCTACAAGGCCACGTTACCCAATGGCAAAATAGTTGCCGTAAAGAAGCTGAACGAAGCGAAAACGCAGGGCCACCGCGAGTTCATGGCTGAAATGGAAACTCTAGGCAAGGtgaagcatcaaaatcttgttccACTGCTAGGATATTGCTCCATGGGAGAGGAAAAACTACTTGTGTATGAATACATGGTGAATGGAAGCTTAGATCTTTGGTTGAAAAACAGAACCATCTCAGGGGCTCTTGAAGTTCTTGACTGGAACAAAAGGGACATTAAAGCTAGCAACATCTTGTTGAATGAAGAATTTGAGCCTAAAGTTTCAGACTTTGGACTTGCGAGGCTTATAAGTGCATGTGAGACCCACATCACCACTGACATTGCTGGAACATTTGGGTACATCCCACCAGAGTATGGGCAGAGTGGGAGGTCCACAACAAAAGGAGATGTCTATAGTTTTGGGGTCATTTTGCTTGAACTGCTGACAGGTAAAGAGCCCACTGGGCCTGGGTTTAAGGACATTGAAGGTGGGAATCTGGTGGGTTGGGTTTTTCTGATGATCAAGAAAGGACAGGCTGCTGATGTTCTTGATCCAACGGTTCTGGATGATGCTGGTTCAAAGCAGATGATGCTTAGGATGCTTCAGATTGCTTGTGTTTGCCTCTCTGATAAGCCTGCAAAAAGGCCCACTATGCTTCAAGTGCTTGAGTTTTTGAAGGGGATTAAAGCCTAA 3858 0.4243 MPVMTYRINLPLGCLFFFVFLLCYSLVVTGIGREEENPERNHLLSFKTSLENPHLLASWNSSNPHCEWVGVTCVLDRVTSLSLPSRSLKGPLSASSLFSLTSLTVLNLSSNALFGEVPPRISNLRNLKELNLRDNHLSGEIPHELGALIRLRTLKLGFNSLAGEIPPELGSLTQLQTLELSDNALAGAVPESIGNLTQLQFLDLSNNLLSGSLPLTLFTKTLSLISLDVSNNSFSGTLPPEIGNLRNITAFYSSSNKFTGRLPSEIGELSRLQVLYAPSCFIEGPLPEEMSKLKSLSKLDLSYNPLKCSIPKFIGEMKSLKILNLAYAQLNGSIPSELGRCRDLGSVMLSFNSLSGSLPEELSQLPMMTFIAEKNQFHGNLPAWLGKWNHIDTLLLSENLFSGKIPPELGNCSSMEHLSLSSNLLTGPIPEELCYAASLLEINLDDNFLSGTIEKAFVECKNLTQLALMNNQFFGSIPQYLSELPLMVLDLDSNNFSANIPSNLWNSSTLMEFSAANNRLEGSLPAEIGNAGILQRLVLSNNLLRGTIPKEIGSLTSLSVLNLNGNLLEGNIPADIGDCISLTNLDLGSNQLNGSIPDKLVDLSQLQCLVLSHNNLSGSIPAKSSSYFGQLTIPDLSFVQHLGVFDLSYNRLSGDIPDELGSCVVIVDLRISNNMLSGSIPRSLSRLTNLLTLDLSSNLLSGSIPPELGDSLKLQGLYLGHNQLTGTIPGSFGKAITMVKLNLTGNKLSGPIPHSFGNMKELTHLDLSSNELSGQLPSSLSGVQSLVGLYVQKNRLSGEVGELFSNSMSWRIETMNLSNNYFNGDLPRSLGNLSYLTNLDLHGNIFVGEIPSELGNLVQLEYVDVSGNKLNGIIPEKICCLLNLKYLDLSQNKLEGPIPRSGICQNLSRVIFTGNKNLCGWMLGTDCPAKNIDRFALFNNAWQLAAIAVTIILMTLSIAFVLHRWISSRRQNDPEELDQEHKLNNYVDRNLYFLSSSSRSKEPLSINVAMFEQPLLKLTLVDILEATGNFSRTNIIGDGGFGTVYKATLPNGKIVAVKKLNEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSMGEEKLLVYEYMVNGSLDLWLKNRTISGALEVLDWNKRDIKASNILLNEEFEPKVSDFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELLTGKEPTGPGFKDIEGGNLVGWVFLMIKKGQAADVLDPTVLDDAGSKQMMLRMLQIACVCLSDKPAKRPTMLQVLEFLKGIKA 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2551 1285 ProSiteProfiles Protein kinase domain profile. 1030 1285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2551 1285 Gene3D Transferase(Phosphotransferase) domain 1 1106 1285 - -
Sto10g2551 1285 SMART LRR_typ_2 481 507 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 124 148 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 759 782 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 687 711 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 603 627 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 317 341 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 100 123 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 196 220 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 172 195 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 881 906 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 639 663 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 293 315 IPR003591 -
Sto10g2551 1285 SMART LRR_typ_2 555 579 IPR003591 -
Sto10g2551 1285 Gene3D Ribonuclease Inhibitor 370 628 IPR032675 -
Sto10g2551 1285 Gene3D Ribonuclease Inhibitor 220 369 IPR032675 -
Sto10g2551 1285 SUPERFAMILY L domain-like 517 708 - -
Sto10g2551 1285 SUPERFAMILY L domain-like 218 479 - -
Sto10g2551 1285 CDD STKc_IRAK 1036 1283 - -
Sto10g2551 1285 Gene3D Ribonuclease Inhibitor 629 934 IPR032675 -
Sto10g2551 1285 SUPERFAMILY L domain-like 663 921 - -
Sto10g2551 1285 SMART LRR_sd22_2 759 785 - -
Sto10g2551 1285 SMART LRR_sd22_2 687 719 - -
Sto10g2551 1285 SMART LRR_sd22_2 100 126 - -
Sto10g2551 1285 SMART LRR_sd22_2 579 605 - -
Sto10g2551 1285 SMART LRR_sd22_2 172 198 - -
Sto10g2551 1285 SMART LRR_sd22_2 881 909 - -
Sto10g2551 1285 Gene3D Ribonuclease Inhibitor 38 150 IPR032675 -
Sto10g2551 1285 Gene3D Ribonuclease Inhibitor 151 219 IPR032675 -
Sto10g2551 1285 SUPERFAMILY L domain-like 42 306 - -
Sto10g2551 1285 Pfam Leucine Rich Repeat 883 901 IPR001611 GO:0005515
Sto10g2551 1285 Pfam Leucine Rich Repeat 126 146 IPR001611 GO:0005515
Sto10g2551 1285 PRINTS Leucine-rich repeat signature 762 775 - -
Sto10g2551 1285 PRINTS Leucine-rich repeat signature 881 894 - -
Sto10g2551 1285 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Sto10g2551 1285 Pfam Leucine rich repeat 739 796 IPR001611 GO:0005515
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 202 387 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 813 1285 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 95 248 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 32 124 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 373 803 - -
Sto10g2551 1285 SMART serkin_6 1030 1280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2551 1285 Pfam Protein kinase domain 1031 1278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2551 1285 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Sto10g2551 1285 ProSitePatterns Protein kinases ATP-binding region signature. 1036 1059 IPR017441 GO:0005524
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 32 124 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 202 387 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 373 803 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 813 1285 - -
Sto10g2551 1285 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 95 248 - -
Sto10g2551 1285 SUPERFAMILY Protein kinase-like (PK-like) 1011 1280 IPR011009 -
Sto10g2551 1285 Gene3D Phosphorylase Kinase; domain 1 993 1105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2551 Sto-Chr10 35848312 35852244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2551 75 747 Receptor kinase-like Gene Family AT5G07280 36.152 2.60e-96 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto10g2551 Pkinase 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2551 - - gmx:100780446 1801.95