Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2543 ATGGGTTTCCTCCGGCGACTTTTCGGCGGCAAGAAATCGGGTTCTCCGGCGGGCGGCTCCGACAACAAATCCGGGTCGGACTCTGGACCCGGCAAGAGCAAACGGAGATGGAGTTTGATCAAACACAGCAAAGGCAGCAAATCTCAGATTGCTACTACTACTTCCTCTGATCTCAACGGCACAGCTTCATTGTTCAGTGATTCCTTGAACGCCAATAAGCATGCCATCGCCGTGGCGGCGGCGACGGCCGCCGTGGCCGAGGCCGCTCTGGCCGCCGCCCAAGCCGCGGCGGAGGTTGTTAGACTTACAagtggtggcggcggcggcgagGGGAGTGTTCCTAGTACTAGCAGCCTGCCCGCTGCCGTGGTGCACGGCGGCGCGAGGCAGCACCGGTGGCCGGAAGAGGTTGCCGCCGTGAAGATTCAATCGGCGTTCCGTGGTTATTTGGCAAAGAGAGCTCTAAGAGCACTGAAAGCATTGGTGAAATTGCAAGCACTGGTGAGAGGTCACATAGTAAGGAAGAAAACTGCAGATATGCTGAGAAGAATGCAAACATTGGTGAGGCTGCAATCCCAGGCACGTGCAGGTCGCGTGCACTTGTCCCATACTCTTCATTCTACCAAGTCTACACTATCTCATCAACACCCTGTCCCTGAATATTATGAGCACCCACTTAGAGCCTACAGTACAAAATTTGAAGGATCTTCTCTGCTCAAGAGAAGCAATTCCAATGCATATTACAGGGAGATTGGCTCGGAGAGGGCAAGGTTCGGCTCGAACTGGTTCGACCGATGGATCGAAGAGAATGTCTGGGACCATCCGAGAGCCGAAAAAAACGAGAGAAGCGACAAGATTCTTGAAGTTGATACATGGAAGCCGCACTTGAAGCCATCCCAGAATGAGAAGAGCCTCATGGCATCATATTTAGCATCATCATATGATCAGTATGATTCTCCCACAAGAACTCTTAACCAAACCCTCTTTGGCTCTCTCAATAAGTTCCCAAAAGGAATTAAAGAATCACAAAAGCTTCCCTCAAGGACAGCAGAAAGTAGTCCAGAGCCATTCTCTTCAGCCTCTTCAAGGAGAATAAGAGCCCCTTTCACACCCACAAGAAGTGAATGTGGCTACATGGGTCACCCCAATTACATGGCCAACACCGAGTCCTCTCGAGCCAAGGTCCGGTCCATGAGTGCACCCAGGCAAAGGGTTTGGGACTCAGGTCCTAATTCTGAAGGCCATGGCTCATCTTCATCATCCCACTTGATGAGCAGATTTGGGGGTTCTAATTTAAGGTCATAG 1305 0.505 MGFLRRLFGGKKSGSPAGGSDNKSGSDSGPGKSKRRWSLIKHSKGSKSQIATTTSSDLNGTASLFSDSLNANKHAIAVAAATAAVAEAALAAAQAAAEVVRLTSGGGGGEGSVPSTSSLPAAVVHGGARQHRWPEEVAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQSQARAGRVHLSHTLHSTKSTLSHQHPVPEYYEHPLRAYSTKFEGSSLLKRSNSNAYYREIGSERARFGSNWFDRWIEENVWDHPRAEKNERSDKILEVDTWKPHLKPSQNEKSLMASYLASSYDQYDSPTRTLNQTLFGSLNKFPKGIKESQKLPSRTAESSPEPFSSASSRRIRAPFTPTRSECGYMGHPNYMANTESSRAKVRSMSAPRQRVWDSGPNSEGHGSSSSSHLMSRFGGSNLRS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2543 434 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Sto10g2543 434 MobiDBLite consensus disorder prediction 1 52 - -
Sto10g2543 434 MobiDBLite consensus disorder prediction 342 434 - -
Sto10g2543 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 180 IPR027417 -
Sto10g2543 434 MobiDBLite consensus disorder prediction 404 434 - -
Sto10g2543 434 MobiDBLite consensus disorder prediction 345 368 - -
Sto10g2543 434 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Sto10g2543 434 SMART iq_5 134 156 IPR000048 GO:0005515
Sto10g2543 434 SMART iq_5 157 178 IPR000048 GO:0005515
Sto10g2543 434 Gene3D - 134 188 - -
Sto10g2543 434 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Sto10g2543 434 PANTHER CALMODULIN-BINDING PROTEIN 1 411 - -
Sto10g2543 434 Pfam IQ calmodulin-binding motif 159 176 IPR000048 GO:0005515
Sto10g2543 434 Pfam IQ calmodulin-binding motif 138 156 IPR000048 GO:0005515
Sto10g2543 434 Pfam Protein of unknown function (DUF4005) 363 415 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2543 Sto-Chr10 35770503 35773292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2543 1 405 IQD Protein Family AT5G62070 48.441 1.28e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2543 - - gmx:100785181 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2543 10 35770503 35773292 Sto10g2543 10 35770503 35773292 ECH