Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2531 ATGGCGGAAATTACTGAAGCTGAGTTTGAGAGGATGTTTGATATCAGTGTGTTGGTGGTCGATAATGACACTACTACCCTCTACATCGTCGCAGTTGTGACCGCTACGAGTGGGCATGAAGCTTTGAAGACTCTACGAGAGTTCGCAGGAATGTTCGACCTCGTAATCACTGACCTTTACATGCAAGGAATGAACGGATTTCAACTCCAAAACCAAATCAAACGAGAATTTCAGCTTCCTGTTATACTGATGTCTGAAGACAGAAGGACTAGTGTGATGTCCAAGGGTTTAGCCAATGGTGCCTCATTCTTCATTGCAAAACCAGTCAAGAAAGATGACTTGAGACATGTTTGGCAATATGTGGTGGCTGCTAGAAAGCACAAATTTCTCTTCAACGACAATAATCTTCTATTAGGAGATGATCATCAATTCTCATTATCATCttcttctcatcatcatcatcctcttgTCAATTCTGCTGCTTCTTCTAATAATTTACTGGTGCTCacaaataatgatgatgatgatgatgatgatggtgatcaTAATAAcagtaatactaataataatgagCAAATTAGAAATAAGAGTAATGGCAAGAGAAGATGTAATAATGATAATGTTGATGATGAAGAATTTGGAGGAGGTCAAAGGAAAAAGCCCAAGGTTGTTTGGACTACTGCTCTTCATAATCGATTCCTCCTGGCTATCAGACAAATTGGAATGAACAAGGCTGTTCCAAAAAAGATTCTTGAACTCATGAACGTGCCAGGTTTGACAAGGGAAAATGTAGCCAGTCATTTGCAGAAAGTTGCGGAGAGAGGACTAATCGACGGTCTATCGGACCGAGCCTTAAGGTCAAGATTCGCCACTGGCCTTCCCATAGCTCTCATCAAAAGCATTAAGAAATCATTTGCTCATCACCATCATCCATATACATCCTCCCTCACTACTACTACACTACCATCCACTCTCACCAATAATCAATACAGACTTCCACCATCAAACAATTATTCCAACGTCACCACCACCAATAATCTTCTCCATAATTCTCCCCACCATCATCTACCAAAATATCACAACAATTACCCTACGAATCTCCAGAATCATCCGAAACCCCAATACCATCAGCGTACTCCTATCGTGCCGTCGTACAATAATAATATCAATGGAATCATCAACAACGGCGGATTCATGACTTCTGCGAACGCGCTCGTCGcgaatggtggtggtggtggcagcaGCAATATTGGGATGATGAATTTGAGCAACTACGGTGCTTCAATGGGGAATCATAGCTATAGCGGCAGTTACAATAACTATGGCGACAACATTAACAAAAATGGGAAAGCGCTTGTTCCTTACGGCAGCTCCGTTATGCAACGAAAAAATACCGCCGCTACTGCAACTGCTACTGCTGCTAATTATAATAGTGATTATTACCCCGCCGCGGCCGCAAGTAATTATGGTAACTACTCTGGGATTCAATTGAATAATAATGCATCCTCTTTTATGGCTACCACTACTACTGGGATGGATCAACGTGGGGTAAACGATATTAATGGCGGTTTCGGTAATTATATGGGAGGAAACAGCGACAACAATATTAGCTTTGGCGGCGGtttaatcaataataataataatgcggATAAGGCGGCGGCGACAGTATTGAATACTGCCACTAAAGAGAATAGTAATATTTCAGTGGCTCCTCCTATTTTGGCTGAGCAAACAAATATTGCATGA 1746 0.3872 MAEITEAEFERMFDISVLVVDNDTTTLYIVAVVTATSGHEALKTLREFAGMFDLVITDLYMQGMNGFQLQNQIKREFQLPVILMSEDRRTSVMSKGLANGASFFIAKPVKKDDLRHVWQYVVAARKHKFLFNDNNLLLGDDHQFSLSSSSHHHHPLVNSAASSNNLLVLTNNDDDDDDDGDHNNSNTNNNEQIRNKSNGKRRCNNDNVDDEEFGGGQRKKPKVVWTTALHNRFLLAIRQIGMNKAVPKKILELMNVPGLTRENVASHLQKVAERGLIDGLSDRALRSRFATGLPIALIKSIKKSFAHHHHPYTSSLTTTTLPSTLTNNQYRLPPSNNYSNVTTTNNLLHNSPHHHLPKYHNNYPTNLQNHPKPQYHQRTPIVPSYNNNINGIINNGGFMTSANALVANGGGGGSSNIGMMNLSNYGASMGNHSYSGSYNNYGDNINKNGKALVPYGSSVMQRKNTAATATATAANYNSDYYPAAAASNYGNYSGIQLNNNASSFMATTTTGMDQRGVNDINGGFGNYMGGNSDNNISFGGGLINNNNNADKAAATVLNTATKENSNISVAPPILAEQTNIA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2531 581 SUPERFAMILY CheY-like 14 125 IPR011006 -
Sto10g2531 581 SMART REC_2 15 118 IPR001789 GO:0000160
Sto10g2531 581 Pfam Myb-like DNA-binding domain 223 270 IPR001005 -
Sto10g2531 581 SUPERFAMILY Homeodomain-like 218 271 IPR009057 -
Sto10g2531 581 CDD REC_typeB_ARR-like 17 122 - -
Sto10g2531 581 Pfam Response regulator receiver domain 31 116 IPR001789 GO:0000160
Sto10g2531 581 Gene3D - 217 274 - -
Sto10g2531 581 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 217 276 IPR017930 -
Sto10g2531 581 MobiDBLite consensus disorder prediction 343 374 - -
Sto10g2531 581 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 546 IPR045279 GO:0009736
Sto10g2531 581 MobiDBLite consensus disorder prediction 168 220 - -
Sto10g2531 581 MobiDBLite consensus disorder prediction 195 218 - -
Sto10g2531 581 PANTHER RESPONSE REGULATOR 23-RELATED 11 546 - -
Sto10g2531 581 Gene3D - 16 180 - -
Sto10g2531 581 ProSiteProfiles Response regulatory domain profile. 1 122 IPR001789 GO:0000160
Sto10g2531 581 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 220 271 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2531 Sto-Chr10 35599173 35604896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2531 12 318 Response Regulator Gene Family AT5G07210 36.391 1.59e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto10g2531 Response_reg 9.4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2531 - K14491 aprc:113866677 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2531 10 35599173 35604896 Sto10g2531 10 35599173 35604896 ECH