Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2528 ATGGATAGCAACCCTCCCACTCCAAAAAACGTGCCTCCTCCACTACAACAACTAACTCCTGATCACCACCACCAGCACCACAAGGattcttcttcttgttgttcttgttctccttcttctcccaaGCCGCGGGCCCCGTCCCCCGGTTCCTCGTCCACCGCGGCAGCTGCGGCTCCGCAGCATGCGAGCCGGCGGCACGCGACGTTCCGGGGGATCCGGAGCCGGAGCGGGAAGTGGGTGTCGGAGATAAGGGAGCCGCGTAAGACCACGCGCATTTGGCTGGGGACGTACCCGACGCCGGACATGGCGGCGGCCGCCTACGACGTGGCGGCGCTGGCGTTGAAGGGCCCCGACACCAACCTCAACTTCCCCAACTCCATCCTGTCCTACCCGATCCCGGCCTCGCTCTCCGCCGCCGATATCCGGGCGGCGGCCGCGGCCGCCGCGGAGGCGAGGAGGGCGGACCGAGGGGAAGGGCCGGGGAGCGGCAAGACGACGTCGTCGTCCACCGCGACCGCGTCGGAGAATGTGGTCTTGGAGAGGAGAAGCGAGGAATTCATCGATGAGGACGAGCTATTGAATATGCCGAACCTTCTGGACGATATGGCGAGGGGAATGCAGATGAATTGGATCGATGCTGCTGctgattaa 651 0.6114 MDSNPPTPKNVPPPLQQLTPDHHHQHHKDSSSCCSCSPSSPKPRAPSPGSSSTAAAAAPQHASRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPDMAAAAYDVAALALKGPDTNLNFPNSILSYPIPASLSAADIRAAAAAAAEARRADRGEGPGSGKTTSSSTATASENVVLERRSEEFIDEDELLNMPNLLDDMARGMQMNWIDAAAD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2528 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF027-LIKE 2 207 - -
Sto10g2528 216 MobiDBLite consensus disorder prediction 1 15 - -
Sto10g2528 216 MobiDBLite consensus disorder prediction 1 79 - -
Sto10g2528 216 ProSiteProfiles AP2/ERF domain profile. 68 124 IPR001471 GO:0003700|GO:0006355
Sto10g2528 216 MobiDBLite consensus disorder prediction 152 176 - -
Sto10g2528 216 MobiDBLite consensus disorder prediction 161 176 - -
Sto10g2528 216 SMART rav1_2 68 130 IPR001471 GO:0003700|GO:0006355
Sto10g2528 216 Pfam AP2 domain 70 116 IPR001471 GO:0003700|GO:0006355
Sto10g2528 216 SUPERFAMILY DNA-binding domain 69 126 IPR016177 GO:0003677
Sto10g2528 216 Gene3D AP2/ERF domain 68 126 IPR036955 GO:0003700|GO:0006355
Sto10g2528 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 207 - -
Sto10g2528 216 CDD AP2 69 126 IPR001471 GO:0003700|GO:0006355
Sto10g2528 216 MobiDBLite consensus disorder prediction 31 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2528 Sto-Chr10 35572194 35573049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2528 63 208 AP2-EREBP Transcription Factor Family AT5G52020 60.274 3.50e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto10g2528 AP2 2.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2528 - - ccaj:109807514 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2528 10 35572194 35573049 Sto10g2528 10 35572194 35573049 ECH