Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2523 ATGGATGTTGCTAAGAGCAACATTAGCTCTGAACCTTCAACTTCTTACAGTTGTTACAAAGTAGGAAGTCTAACTGAAACCATACTGGACACACAGGAGACTGCAAATTTGAAAGATCGGTACGTTCTGGGTGAGCAGTTGGGTTGGGGACAGTTTGGTGTTATTAGAGCTATTACTGACAAGCTGACTGGAGAGGTTTTGGCCTGCAAATCAATTGCGAAAGATCGATTGGTTACTGTGGATGATCTGCGAAGTGTCAAACTTGAGATTGAGATAATGGCTAGGTTATCAGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGGTTTTGTTCATCTGGTGATGGAGCTTTGTGCTGGAGGTGAATTGTTTCAACGGCTAGAGAAGCATGGGCGATTTTCTGAATCTGAAGCCAGGGTTCTCTTTAGGCACCTCATGCAAGTGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGACTTGAAGCCTGAGAACATTCTGTTGGCTACAAGAGCCTCTTCGTCGCCTATTAAATTGGCAGATTTCGGGCTTGCAACCTACATCAAGCCTGCAGGACAAAGTTTGCATGGGTTAGTAGGGAGTCCATTCTATATAGCTCCAGAGGTACTTGCAGGTTCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGTGTGATACTTTACATTCTACTGAGTGGGATGCCTCCTTTTTGGGGGAAGACCAAGTCGCAGATATTTGAAGCTGTCAAGGCTGCTGACCTGAGGTTCCCGTCTGAACATTGGGATCACATTTCTAAATCAGCTAAGGACTTAATCAAGGGAATGCTCTGCACTGAACCTTCTCGAAGGCTCACCGCCCAGCAGGTTTTGGATCATTGCTGGATGGAGAGCAATCTAACAAATTCTGAACAACTAAACGAACATGACATCCTAAGTTATGGACAATGGGATTTTGGTGACAGCTCATTCTCTGCGTCCTTAATGACAAGGAATCAGGACATAAGCTTTGGCGCTGAATCTCCTGCGTGTGATGCTCAATCACCTACTTTCACATGCAGatcatcattttcttcttttctggtGGAACCATCAACTCCTTGTGCGCCTTCAGGAGGGTTTTCATTTCAGAGCTCTGGTGCATCCCCTGGTTTGGAATTCTCTTCTCCTGTTCCTTCAATGCCTAGCTTTGCATTTCTCAGCCCCAATTCTGTTGTTGAGAAAAGGAGTGGTACATTAGAGTTCTCAACTAACACTTCTAATGTAAAGACAATGGTTGATGAAGCAAGCTTGGGGAAACTACTTCTGCTACCAGATTCGACTCTTTGTTTTGGGCCAGAGGTTAAAGTGATCAATCACAAGCCGCTGGAGACTAAAAGGTCCGGTGGTACAAATGGACATCGGGTTCTGGGAATCCACAGTAAGAGAAATCGAACAATTGGACTTGGTGAACGTGAGCAAATTGACCTGGTGGTGACCGAATCGGTCATTCGATGGTCATCGTGCACGCAACTCCCTACATCTCTTAGGTCATCTCTTGTCTGTTAA 1560 0.4436 MDVAKSNISSEPSTSYSCYKVGSLTETILDTQETANLKDRYVLGEQLGWGQFGVIRAITDKLTGEVLACKSIAKDRLVTVDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFQRLEKHGRFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATYIKPAGQSLHGLVGSPFYIAPEVLAGSYNQAADVWSAGVILYILLSGMPPFWGKTKSQIFEAVKAADLRFPSEHWDHISKSAKDLIKGMLCTEPSRRLTAQQVLDHCWMESNLTNSEQLNEHDILSYGQWDFGDSSFSASLMTRNQDISFGAESPACDAQSPTFTCRSSFSSFLVEPSTPCAPSGGFSFQSSGASPGLEFSSPVPSMPSFAFLSPNSVVEKRSGTLEFSTNTSNVKTMVDEASLGKLLLLPDSTLCFGPEVKVINHKPLETKRSGGTNGHRVLGIHSKRNRTIGLGEREQIDLVVTESVIRWSSCTQLPTSLRSSLVC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2523 519 SMART serkin_6 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2523 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Sto10g2523 519 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Sto10g2523 519 Gene3D Transferase(Phosphotransferase) domain 1 128 322 - -
Sto10g2523 519 ProSiteProfiles Protein kinase domain profile. 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2523 519 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 512 - -
Sto10g2523 519 Pfam Protein kinase domain 41 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2523 519 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Sto10g2523 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 512 - -
Sto10g2523 519 CDD STKc_CAMK 40 299 - -
Sto10g2523 519 SUPERFAMILY Protein kinase-like (PK-like) 38 386 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2523 Sto-Chr10 35514896 35517390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2523 28 305 EF-hand Containing Proteins AT3G57530 48.561 3.85e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto10g2523 Pkinase 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2523 - - gmx:100776088 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2523 10 35514896 35517390 Sto10g2523 10 35514896 35517390 ECH