Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2497 ATGCCATCCTCTTTATCACCGCCGTCCACGGTGGTCGCCGTCGACCCATATCCTCCTTGCTCCATCTTCCTCCTCGCTTTCCTCTGTTTTCGCAGCAGCAGAAATCGCACCACCCCTTCTTCCTCCGATTCCCCATCCAAGCCCCCTCCTCATCGCTTCTCCTACTCCCTCCTCCGCCACGCCACCGCCTCCTTCTCCACCCTCATAGGCCACGGCGGCTTCGGCCCGGTCTTCTCCGGGTCCCTGCCCTCGACCCGAAAGCCCATCGCCGTCAAGCTCATGGACTCCACTTCCCTCCAAGGCGAGCGCGAGTTTCACAACGAGCTCCTCTTCGCCTCCAAACTCCACTACTCCCCACACGTCGTCGTCCCGACGGGATTCGCCGCCGTCAAAGCCCGCCGGAGATTCCTCCTCGTGTACGAACTCATGCCCAACGGGAACCTCCAGGACGCCTTACTACGACGGAAATCCCCCGAGCTAAGGAACTGGAAGAAACGTTTCGCCATCATCATCGACATCGCGAGAGGAATCCGTTACCTCCACCACTCCTGCGACCCCCCGGTGATTCACGGCGATATCAAGCCCAGTAATATCCTCCTCGACGCCTCCTTCTCCGCGAAAATCGGAGATTACGGACTCGCCAGATTGAAATCGGAATCCCAATTCGACGTCGAGAGCGAGACTTTCAGTAATAGTGGGGTCGAAGAAACAGAGAGTATTAGTATTAGTATAAATACAGAGCCATCGCCGGaaacagaggaggaggaggcgaATTTGGGGAAACCCAAGAAATTCGATTGGTGGTTCGAGGGACGAAGCAGAAGCGTTAACGAAAGTAGTAGTACCAAATACGGAATCAATAGTACGCCAAGCATGAGAGGTACGGTGTGCTACGTAGCGCCGGAGTATAACTACGAGATAACAGAGAAATGCGATGTGtacggttttggggttttaatTCTGGTGATGGTTTCGGGGCGGCGGCCGTTggaggcggcggcggcggcgagtGGTGGCTCGCCGTTGTCGGAGCTCCAGAGAGGGAATCTGTTGAGCTGGGCGAGACATTGCGCGAGAAATGGGAAATTGCTTGAGATTGTGGACGAGTCGTTAAAGTCGTTGGATACGGAGGAGGCTCTTTTGTGTATGAAAGTGGCTTTGTTGTGTTTGTTGAAGTCGCCTTCTCGTCGGCCGTcgatggaggaggtggtgggGATGCTGTGCGGGGAGGTGGAGCCGCCGCCACTGCCGGCGGAGTATTCGCcttcgccgccgccgccgcggtCACGGTTTCCGTTCAAGTGCGAGAGAAATGAACGGTGA 1323 0.5155 MPSSLSPPSTVVAVDPYPPCSIFLLAFLCFRSSRNRTTPSSSDSPSKPPPHRFSYSLLRHATASFSTLIGHGGFGPVFSGSLPSTRKPIAVKLMDSTSLQGEREFHNELLFASKLHYSPHVVVPTGFAAVKARRRFLLVYELMPNGNLQDALLRRKSPELRNWKKRFAIIIDIARGIRYLHHSCDPPVIHGDIKPSNILLDASFSAKIGDYGLARLKSESQFDVESETFSNSGVEETESISISINTEPSPETEEEEANLGKPKKFDWWFEGRSRSVNESSSTKYGINSTPSMRGTVCYVAPEYNYEITEKCDVYGFGVLILVMVSGRRPLEAAAAASGGSPLSELQRGNLLSWARHCARNGKLLEIVDESLKSLDTEEALLCMKVALLCLLKSPSRRPSMEEVVGMLCGEVEPPPLPAEYSPSPPPPRSRFPFKCERNER 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2497 440 Pfam Protein tyrosine and serine/threonine kinase 65 224 IPR001245 GO:0004672|GO:0006468
Sto10g2497 440 MobiDBLite consensus disorder prediction 415 440 - -
Sto10g2497 440 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 264 439 - -
Sto10g2497 440 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 20 258 - -
Sto10g2497 440 PANTHER OS07G0586332 PROTEIN 20 258 IPR044576 -
Sto10g2497 440 PANTHER OS07G0586332 PROTEIN 264 439 IPR044576 -
Sto10g2497 440 ProSiteProfiles Protein kinase domain profile. 63 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2497 440 SUPERFAMILY Protein kinase-like (PK-like) 38 407 IPR011009 -
Sto10g2497 440 MobiDBLite consensus disorder prediction 237 260 - -
Sto10g2497 440 Gene3D Transferase(Phosphotransferase) domain 1 143 412 - -
Sto10g2497 440 MobiDBLite consensus disorder prediction 415 431 - -
Sto10g2497 440 Gene3D Phosphorylase Kinase; domain 1 50 142 - -
Sto10g2497 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Sto10g2497 440 SMART serkin_6 63 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2497 Sto-Chr10 35247582 35249138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2497 10 417 Receptor kinase-like Gene Family AT4G23190 30.048 1.38e-45 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Sto10g2497 PK_Tyr_Ser-Thr 4.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2497 - - ccaj:109790389 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2497 10 35247582 35249138 Sto10g2497 10 35247582 35249138 ECH