Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2474 ATGGAGGCTCCAACTCTCACGGGATTGCTAAAACGCGTCGCCGATCAATTTCCTTCCCGGCGAGCCATCTCCGTCGCCGGCAACTTCGATCTCACATACTCTCGCCTCCTCGAACTCATCGATCGAGCCGCTTCTCGTTTAGTCTCATCCGGAATCAACGCCGGCGATGTCGTCGCCCTCACCTTCCCCAACAACGTCGAGTTCGTCGTAATGTTTCTGGCCGTAATTCGAGCACGAGCCACGGCTGCGCCTCTGAATCCGGCCTACACGACCGAGGAGTTTGAGTTTTACCTTTCTGATTCCGAATCGAAGCTATTATTGACGTCTCAAGAAGGAAACGCGTCGGCTCAAGCCGCGGCTTCGAAGCTTAGCATCCCTCACGTGACGGCTTCACTTCCCAAAGCCGATGACGCCGAGCTCAGTCTCTCGTTGAATGAATCCGAGTCGGCTCCCGGAGCCGACTCGGTTCTCAGGCTCGTCAACGACCCATCCGACGTGGCCCTATTCCTCCACACCTCCGGCACGACGAGCCGGCCCAAAGGAGTGCCTCTGACTCAGCACAACCTAGCGGCTTCGGTTCAGAACATAAAGTCAGTCTACAAACTCACTGAGTCAGACTCGACGGTAATCGTTCTCCCACTGTTTCACGTCCACGGACTCATCGCCGGTTTACTGAGTTCACTCGGCGCCGGCGCGTCCGTCGCGCTGCCGGCGGCGGGTCGCTTCTCGGCTTCAACGTTTTGGCCAGACATGCTTAGCCACAACGCCACGTGGTACACGGCGGTTCCTACGATTCACCAGATCATACTGGATCGTCACCAGAGCAAGCCCGAACCGGTTTACCCGAAACTCCGGTTCATCCGCAGCTGCAGCGCGTCGCTCGCGCCCACCATATTGGTCCGGTTGGAGGAGGCGTTTGGGGCTCCGGTTTTGGAGGCGTATGCGATGACTGAGGCGTCGCATCTCATGTGTTCAAACCCGTTGCCCGAGGACGGGCCGCACAAGCCCGGGTCGGTTGGAAAGCCCGTGGGTCAAGAATTGGCGATCCTGAATGAGAAGGGTGAAATCCAGAAGGCAGAAGTGAAAGGAGAGGTTTGTATCAGAGGGCCGAATGTGACAAAAGGGTACAAGAATAACCCGCAAGCTAATACGACAGCGTTTGAGTTCGGCTGGTTTCACACCGGTGATATTGGGTTTTTGGATTCCGATGGGTATTTGCATCTCGTGGGCCGAATCAAGGAACTCATTAACCGTGGAGgtgAGAAAATATCACCAATTGAAGTGGATGCTGTCCTATTATCTCATCCAGACGTTGCTCAAGCCGTTGCTTTCGGAGTGCCTGATGAAAAATATGGCGAAGAGATAAACTGTGCAATAATAGCAAGAGAAGGATCAAACATTGACGAGGAAGAGGTTCTAAGATTTTGCAAGAAGAATCTTGCGTCGTTTAAAGTCCCCAAAAAGGTCTACCTCACTGATTCCTTACCAAAAACCGCCACCGGAAAGATTTTAAGGCGTCTTGTGGCGGAACATTTCGTTGCTAAAAAATGA 1551 0.5364 MEAPTLTGLLKRVADQFPSRRAISVAGNFDLTYSRLLELIDRAASRLVSSGINAGDVVALTFPNNVEFVVMFLAVIRARATAAPLNPAYTTEEFEFYLSDSESKLLLTSQEGNASAQAAASKLSIPHVTASLPKADDAELSLSLNESESAPGADSVLRLVNDPSDVALFLHTSGTTSRPKGVPLTQHNLAASVQNIKSVYKLTESDSTVIVLPLFHVHGLIAGLLSSLGAGASVALPAAGRFSASTFWPDMLSHNATWYTAVPTIHQIILDRHQSKPEPVYPKLRFIRSCSASLAPTILVRLEEAFGAPVLEAYAMTEASHLMCSNPLPEDGPHKPGSVGKPVGQELAILNEKGEIQKAEVKGEVCIRGPNVTKGYKNNPQANTTAFEFGWFHTGDIGFLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQAVAFGVPDEKYGEEINCAIIAREGSNIDEEEVLRFCKKNLASFKVPKKVYLTDSLPKTATGKILRRLVAEHFVAKK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2474 516 Gene3D - 2 411 IPR042099 -
Sto10g2474 516 SUPERFAMILY Acetyl-CoA synthetase-like 5 514 - -
Sto10g2474 516 ProSitePatterns Putative AMP-binding domain signature. 169 180 IPR020845 -
Sto10g2474 516 PANTHER OXALATE--COA LIGASE-LIKE 4 514 - -
Sto10g2474 516 Pfam AMP-binding enzyme 11 418 IPR000873 -
Sto10g2474 516 PANTHER ACYL-COA SYNTHETASE 4 514 - -
Sto10g2474 516 Pfam AMP-binding enzyme C-terminal domain 427 502 IPR025110 -
Sto10g2474 516 CDD FACL_fum10p_like 18 510 IPR045310 GO:0016874
Sto10g2474 516 Gene3D - 412 514 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2474 Sto-Chr10 35055051 35060339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2474 5 515 Monolignol Biosynthesis Gene Families AT4G05160 30.344 1.22e-60 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2474 K22133 - vvi:100256632 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2474 10 35055051 35060339 Sto10g2474 10 35055051 35060339 ECH