Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2464 CTGGATCTCTTCTTCTCAGTCTCAGATTTATTTACCGAATCGAGAAAGAAAACAGAGTACGTACTCGATTTTGCTTTCTCTGTTTCTCTCATTTCTGAAGAGATTCGAAATCCAAGGAAGAGGAGCATAGTGCTGGTGGTTCTGGAGATGGAATCCGTCGTCGTTTTGGCATTGTTCGCTTTCGTGGCTTTCGCGCCATGGCGCGTACTCTCGGAAGAGAAGCTTCTGGTGAATATGACGCTGGTTCGAAACGCTCGAGCTCTCGGTGCTCTTTGTTTGGATGGGAGTTTACCGGCGTATCATTTGCACAGAGGATACGGAGCGGGAGCTAACAACTGGCTTTTACAATTTGAGAGTAGAGAAGAGTCGTGTCGTGTGTGTGCGAAAAAGTTGTGGCGGTGTATTCTAAATTTTGGGGCGAAGAGTGATGATTGGTTGGTTTCGAAATCCTATACGACAATCCTTTTTGTGTCGTCTTTCTGGAGTTTTGCGCGCGCATTCTTTTGGGAACTGGAATCTGGTGCTTCACTTGCTCGCGGGTGA 543 0.4696 LDLFFSVSDLFTESRKKTEYVLDFAFSVSLISEEIRNPRKRSIVLVVLEMESVVVLALFAFVAFAPWRVLSEEKLLVNMTLVRNARALGALCLDGSLPAYHLHRGYGAGANNWLLQFESREESCRVCAKKLWRCILNFGAKSDDWLVSKSYTTILFVSSFWSFARAFFWELESGASLARG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2464 180 PANTHER PECTIN ACETYLESTERASE 9 69 121 - -
Sto10g2464 180 PANTHER NOTUM-RELATED 69 121 IPR004963 GO:0016787
Sto10g2464 180 Pfam Pectinacetylesterase 71 119 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2464 Sto-Chr10 34917997 34919353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2464 47 119 Carbohydrate Esterase AT5G23870 57.534 1.58e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2464 K19882 - tcc:18605577 101.293