Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2462 ATGCAGTACAACGACAAGGTGGTGGGATGCAAAAGCACTTATTTGGTTGCAAAATCGAATAGGTCCTCCAAGATTATAGAATTTTGCTCTGTGGCACCATGGTCGCCGGAAACAGCCACTTCCTCCGCCGCGACTTCTCTATCCCTCACCTTTTCCGACATAATGTGGCTCAAATTCGGAGCCGTTAAGCGTGTTTTCTTCTACGAATTCCCTCACCCACCTTCTTCCTTCATCGATTCCCTTCTTCCCAAACTCAAACActccctctctctcactctccacACCTTCCTCCCTCTCGCTTCCACCCTCACTTGGCCCTCTCACTCCCCTCTTCCCACCATCGCCTACCTTCCCGGCGACGCCGTCTCCCTCACCGTCGCCGAATCCGACTCAGATTTCAATCAACTTTCGGGTTTTGATTTCTCCGACCCCGCGGAAACCCGATCGCTCGTACCCCACCTGACCATTTCTGAAGATCGAGCTTCGGTCATGGCTCTGCAGGTTACTCTGTTTCCGAACTCTGGTTTTTCCATTGGAATCGCCACACACCATGCGGCTATGGATGGGAAATCTGCCACTTCCTTCATGAATTCCTGGGCTTATATCTGCTCTAACCTCGAAGATTCTTCAGATTCCTCGTCGTTTCCGGAGCATCTAGTACCTTTCTATGACAGATCTGTGATCAAAGACCCATGTGGAGTCGCTGAGAGATTCGCGAATTTTTGGATGCAAAATAATGGAGGACCAAACAAGAGAAGCTTGATGCCCTGGGAATTCCCAAGGGCAAATCAATCGAAGCTAAAAAGGGGGACGTTTGAATTGACCCCATCAAGTATTTCAAAGCTGAAGAAATCTGCGGAGTCTAAGGTGAAGCAAGGGGTTCGCGTGTCATCGTTTTCGGTGACATGTGCGTATGTGTTGGAGTGCATAGTGAAAGCAGAGGAAACAGAGGAAAACAGAGTGCTCTTCACTTTCGGCGCCGACTTAAGGTCGCGTTTGGATCCTCCGGTTCCACCCACGTATTTCGGGAATTGCGTGGGAGGGGCGATGTTTGTATTCGAGACGAAGAGATTGATGGAGGGAGATGGGTTTGTGTGTGGCGTTGAAGGGATAAGTGAAGGTTTGAAGagaatggaagaagaagaggatttGATCAGTGAAGCAGAGAGGTTGTTTTTGGAGACGGGAAAGATGATGAGGGATAAGAATGTGAGGAGTTTCACACTTGCTGGGTCGCCTAGGTTTGATGTTTATGGTAATGATTTTGGGTGGGGAAGGCCGAAGAAGGTGGAGGTAGCTTCAATTGATGAGACAGGATCCATTTCTCTTGCAGAAAGTAGGAACAAGAATGGAGGTATTGAGATTGGGTTGGTGTTGAATCAAACTGTAATGGAGGCCTTTGCTTCACTTTTTCTTAAACGTCTTTGA 1428 0.4692 MQYNDKVVGCKSTYLVAKSNRSSKIIEFCSVAPWSPETATSSAATSLSLTFSDIMWLKFGAVKRVFFYEFPHPPSSFIDSLLPKLKHSLSLTLHTFLPLASTLTWPSHSPLPTIAYLPGDAVSLTVAESDSDFNQLSGFDFSDPAETRSLVPHLTISEDRASVMALQVTLFPNSGFSIGIATHHAAMDGKSATSFMNSWAYICSNLEDSSDSSSFPEHLVPFYDRSVIKDPCGVAERFANFWMQNNGGPNKRSLMPWEFPRANQSKLKRGTFELTPSSISKLKKSAESKVKQGVRVSSFSVTCAYVLECIVKAEETEENRVLFTFGADLRSRLDPPVPPTYFGNCVGGAMFVFETKRLMEGDGFVCGVEGISEGLKRMEEEEDLISEAERLFLETGKMMRDKNVRSFTLAGSPRFDVYGNDFGWGRPKKVEVASIDETGSISLAESRNKNGGIEIGLVLNQTVMEAFASLFLKRL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2462 475 Gene3D - 265 475 IPR023213 -
Sto10g2462 475 SUPERFAMILY CoA-dependent acyltransferases 251 472 - -
Sto10g2462 475 Pfam Transferase family 41 469 - -
Sto10g2462 475 Coils Coil 371 391 - -
Sto10g2462 475 PANTHER - 19 474 - -
Sto10g2462 475 Gene3D - 22 251 IPR023213 -
Sto10g2462 475 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 19 474 - -
Sto10g2462 475 SUPERFAMILY CoA-dependent acyltransferases 105 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2462 Sto-Chr10 34900741 34903381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2462 39 473 Monolignol Biosynthesis Gene Families AT5G48930 24.045 2.07e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2462 - - gmx:100800849 446.432