Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2459 ATGAGCTCCTCCAAGACTATAGAAGTTTGCTCTGTGGCACCATGGTCGCCGGAAACACCCACTTCCTCCGCCGCGACTTCTCTATCCCTCACCTTTTCCGACATAATGTGGCTCAAACTCCTACCCGTTAAGTGGCTTTTCTTCTACGAATTCCCCCACCCACCTTCCTCCTTCTTCGATTCCCTTCTTCCCAAACTCAAACActccctctctctcactctccacGCCTTCCTCCCTCTCGCTTCCACCCTCACTTGGCCCTCTCACTCCCCTGCTCCCACCATCGCCTGCCTTCCCGGCGACGACGGCGTCTCCTTCACCGTCGCCGAATCCGACTCAGATTTCAATTATCTTTCGGGTTTTGATTTCCCCGACGCTGCTGAAACCCGATTGCTGGTACCCCACTTGACCATTTCTGAAGACCGAGCTTCGGTCATGGCTCTGCAGGTTACTCTGTTTCCGAACTCTGGTTTTTCCATTGGAATCACCACACACCATGGGGCTATGGATGGGAAATCTTTCACTTCCTTCATGAATTCCTGGGCTTATATCTGCTTCCACCTCCAAGATTCTTCCgatctctcttcttctcctccatcGTTGCCGGAGCATCTAGTACCTTTCTATGACAGATCTGTGATCAAAGACCCATGTGGGGTGGCTGAGAGATTTGCGAATTTTTTGATTCAAAATGGAGGACCAAACAAGAGAAGCTTGATGCTCATGGATCTTCCAATGGCAGATCAATCGAAGCTAAAAAGGGGGACGTTTGAATTGACCCCATCAAGTATTTCGAAGCTAAAGAAATCTGCGGAGTCTAAGGTGAAGCAAGGGGTTCGCGTATCGTCTTTTATAGTGGCATGTGCGTATGTGTTGGAGTGCTTAGTGAAAGCAGAGAAAACAGAGGAAAACAGAGTGCTCTTCACTTTCGGCGCCGACTTAAGGTCGCGTTTGGATCCTCCGGTTCCTCCCACGTATTTCGGGAATTGCTTGGGAGGGGCGATGTTTGTATTCGAGACGAAGAGATTGATGGAGGAAGATGGGTTTGTGTGTGGCGTTGAGGGTATAAGTGAAGGtttgaagaaaatggaagaagaagaggatttGATAAGTGAAGCAGAGAGGGTGTTTTTAGAGACGGGAAAGATGATGAGGGATAAGAATGTGAGGAGTTTCACAGTTGATGGGTCGCATAGGTTTGATGTTTATGGTAATGATTTTGGGTGGGGAAGGCCCAAGAAGATGGAGATAGTTTCGATTGATGAGACAGGAGCCATTTCTCTTACAGAAAGTAGGAACAAGAATGGAGGTATTGAGATTGGGTTGGTGTTGAATCAAACTAATGCTGTTTCGGATTCCAGACGATTTCAGAGGCCTAATCTGCaacgaggaggaggaggtggtgacAAATATGATGACCTGGTTAAAGTGGTTCAATCTTTTTTTGTGCGGGGCTTTTTGTTGAAGGATCTTAATCGTACTTTCATCACGCTTATTCCAAAGATAGATGTTCCTGAAAAGCTAAAGGATTTTCGGCCTATCAGTCTGTGTAATGTCATTCTAAAGGCCCAGAAGAATAAAGAGCTACTTGGTGTTCGGTTTGCTCGAAGAGGACCTGTCATTACTCATCTGATGTACGCTGATGATACAATTCTTTTTTTCAAGGCCGATGATTCAAATTGCGCTGTGATCAAAGCAGCGCTTGATATGTATGGTAATCTGGCAGGTCAAAAACTTAATTCAGACAAGTTGTTTCTTGTTTTCAGTCCTAATACTCCAGCAACTATTAAGGATCGTATTACTCACTGTTTTGGAGTTTCAATTTCAACAAAGGTTGGCAGGTATTTGGGAACTTATGTTGACAGTCGCATGTCAGATACTCAAAACTATCGTGCTTTGGTTGAGAAGGGGAATAATAAATTAGTAGGGTGGAAAGCTCTAACTCTTTCGCAAGCAGGGCGCTTAACTCTTATCAAGGCGGTTCTTCAGCCTCTTAATAATTATCAAATGTCTCATCTAGTTGTTCCAAAGAAATATTGTCATCAGATGGATGCTGCCTGTTCGAACTTTTTTTGGGGATTTCGTAAAGATAAGCCAGCTATACATCTTCTTAATAAGAATAAAATCTTTGCTCCCAAGGATCGTGGAGCTAGTTCTCAAAATCAGCAGTCCCTTGAGGTGATCATTTTTCAGAAGCCTGGATATATGTCTCTTTTGAAAGGCCGGTTTCTTCACTACAGTGAGGCAATAATATCCAGAGATGTGGCAAAGCTTCTATCTTCCCAAAACGTGTTGGTTCGGCTCTCTAATGATGTCATTCTTCAACATACCAATAATTTTGATCGTCTTATGTCACAATATGTCTTCACAGGGACTGGTACTTTCTCTTTGTCTATATTTGGCCAGAAGATCAGCACACCTGTTCTTCTCCCGATGGACGTGGGCGAGACTGCAGTGATCGAATTGAAGTTGGAACAACCTGCACTCATTGATTAG 2496 0.4275 MSSSKTIEVCSVAPWSPETPTSSAATSLSLTFSDIMWLKLLPVKWLFFYEFPHPPSSFFDSLLPKLKHSLSLTLHAFLPLASTLTWPSHSPAPTIACLPGDDGVSFTVAESDSDFNYLSGFDFPDAAETRLLVPHLTISEDRASVMALQVTLFPNSGFSIGITTHHGAMDGKSFTSFMNSWAYICFHLQDSSDLSSSPPSLPEHLVPFYDRSVIKDPCGVAERFANFLIQNGGPNKRSLMLMDLPMADQSKLKRGTFELTPSSISKLKKSAESKVKQGVRVSSFIVACAYVLECLVKAEKTEENRVLFTFGADLRSRLDPPVPPTYFGNCLGGAMFVFETKRLMEEDGFVCGVEGISEGLKKMEEEEDLISEAERVFLETGKMMRDKNVRSFTVDGSHRFDVYGNDFGWGRPKKMEIVSIDETGAISLTESRNKNGGIEIGLVLNQTNAVSDSRRFQRPNLQRGGGGGDKYDDLVKVVQSFFVRGFLLKDLNRTFITLIPKIDVPEKLKDFRPISLCNVILKAQKNKELLGVRFARRGPVITHLMYADDTILFFKADDSNCAVIKAALDMYGNLAGQKLNSDKLFLVFSPNTPATIKDRITHCFGVSISTKVGRYLGTYVDSRMSDTQNYRALVEKGNNKLVGWKALTLSQAGRLTLIKAVLQPLNNYQMSHLVVPKKYCHQMDAACSNFFWGFRKDKPAIHLLNKNKIFAPKDRGASSQNQQSLEVIIFQKPGYMSLLKGRFLHYSEAIISRDVAKLLSSQNVLVRLSNDVILQHTNNFDRLMSQYVFTGTGTFSLSIFGQKISTPVLLPMDVGETAVIELKLEQPALID 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2459 831 Gene3D - 250 457 IPR023213 -
Sto10g2459 831 Gene3D - 4 233 IPR023213 -
Sto10g2459 831 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 3 448 - -
Sto10g2459 831 Pfam Transferase family 17 447 - -
Sto10g2459 831 Coils Coil 356 376 - -
Sto10g2459 831 PANTHER - 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2459 Sto-Chr10 34850234 34866601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2459 46 448 Monolignol Biosynthesis Gene Families AT5G48930 26.415 6.23e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2459 - - gmx:100800849 423.32