Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2458 ATGGCCAAGTCTCCTAATTCTAATGATCAAAAGAATAATGGATTGAAGGGAGGTCCATGGACTCCACAAGAAGATCAGAAGCTCATCGACTATATTAAGAAACATGGATATGTCAAATGA 120 0.375 MAKSPNSNDQKNNGLKGGPWTPQEDQKLIDYIKKHGYVK 39
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2458 39 MobiDBLite consensus disorder prediction 1 19 - -
Sto10g2458 39 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 37 - -
Sto10g2458 39 SUPERFAMILY Homeodomain-like 11 37 IPR009057 -
Sto10g2458 39 Gene3D - 8 39 - -
Sto10g2458 39 Pfam Myb-like DNA-binding domain 18 38 IPR001005 -
Sto10g2458 39 MobiDBLite consensus disorder prediction 1 26 - -
Sto10g2458 39 CDD SANT 19 36 IPR001005 -
Sto10g2458 39 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 39 IPR017930 -
Sto10g2458 39 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2458 Sto-Chr10 34845523 34845642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2458 1 37 MYB Transcription Factor Family AT4G05100 67.568 2.71e-11 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto10g2458 Myb_DNA-binding 3.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2458 K09422 - aip:107629266 60.077