Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2444 ATGGCTCCTAAACAGCCAAGTACAGGCTTGTTTGTCGGGTTGAACAAGGGTCATGTTGTGACCAAGAAGGAATTGGCTCCACGCCCATCAGAtcgcaaagggAAAACAAGCAAGCGCGTCCACTTTGTGCGCTCGTTGATCCGTGAAGTTGCAGGGTTTGCTCCATATGAGAAGCGTATAACTGAGCTTCTCAAGGTAGGTAAAGATAAAAGAGCTTTGAAAGTGGCAAAGAGAAAGCTTGGCACTCACAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCCAACGTTCTCCGAAAGATGAGGTAA 306 0.4575 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2444 101 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 101 - -
Sto10g2444 101 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto10g2444 101 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto10g2444 101 Gene3D 60S ribosomal protein L36 1 101 IPR038097 -
Sto10g2444 101 MobiDBLite consensus disorder prediction 87 101 - -
Sto10g2444 101 Coils Coil 83 101 - -
Sto10g2444 101 PANTHER 60S RIBOSOMAL PROTEIN L36 1 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto10g2444 101 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2444 Sto-Chr10 34663893 34669815 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2444 8 101 Cytoplasmic Ribosomal Protein Gene Family AT2G37600 88.298 3.23e-55 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2444 K02920 - egr:104424428 199.904