Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2440 ATGCACCGAAACGACACCGTCGTCTACGACCGTACCCACATCAAGGCCATCGCGCTCGACATGATCGCGGCCGCATTCGAGACCTCCGCCACCGTCATCGTGTGGGCCCTCTCCGAGCTCCTCCGCAACCCGCGCGTCATGAAAGCCCTCAAACACGAGCTACGGCGACACGCAGCAGAGACGTTCCGATTGCATCCGGCGGGGTCGCTGTTACCGCGGGAGGCGATCGAGGATGCTAGGGTTGGGGAATGGTGGATCGAGAAGGGGACGAGGGTTATTGTGAATGTGTGGGCGATGGGGAGGGATAGGAGCGTGTGGTCGGAGAATGCGGAGGAGTTTTGGCCGGAGAGGTTTGAGGAGAGAGAGGTGGATTTCCGAGGGCGGGAGAGTTTGATGTTTGTGCCGTTTGGGAGTGGTCGGAGAGGATGTCCGGGGATACATTTAGGGCTGAGTACGGTGAAGCTTGTGGTGGCTCAGATGGTGCATTGCTTTGAGTGGGAGCTTCCGGGAGGAATGGGCCCTGAGGAGTTGGATATGGGTGAGAAGTTTGGGCTTTCTATGCCCAAAGCCGAGCACTTGCTTGCTGTGCCTAGCATGTCCAAATGGGTCGACCTGGCCCACCAAGGACTTTGA 633 0.5877 MHRNDTVVYDRTHIKAIALDMIAAAFETSATVIVWALSELLRNPRVMKALKHELRRHAAETFRLHPAGSLLPREAIEDARVGEWWIEKGTRVIVNVWAMGRDRSVWSENAEEFWPERFEEREVDFRGRESLMFVPFGSGRRGCPGIHLGLSTVKLVVAQMVHCFEWELPGGMGPEELDMGEKFGLSMPKAEHLLAVPSMSKWVDLAHQGL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2440 210 PRINTS E-class P450 group I signature 13 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS E-class P450 group I signature 33 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS E-class P450 group I signature 133 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS E-class P450 group I signature 143 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 59 202 - -
Sto10g2440 210 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 55 - -
Sto10g2440 210 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 55 - -
Sto10g2440 210 PANTHER CYTOCHROME P450 FAMILY PROTEIN 59 202 - -
Sto10g2440 210 Pfam Cytochrome P450 7 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 Pfam Cytochrome P450 60 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 136 145 IPR017972 GO:0005506|GO:0016705
Sto10g2440 210 Gene3D Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 SUPERFAMILY Cytochrome P450 6 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS P450 superfamily signature 24 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS P450 superfamily signature 56 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS P450 superfamily signature 134 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto10g2440 210 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2440 Sto-Chr10 34643912 34644632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2440 4 198 Monolignol Biosynthesis Gene Families AT4G36220 42.396 2.59e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2440 - - gmx:100814172 242.662