Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2439 ATGGATTGGAATCATCTGAAGCAATCCGATTGCGCGAAGGCCAACAGCGCAGGTTCGAACCCGTTACGGAAGGTTCGGGTCGTGGCCAAGGTCCGGGGATGTACGGATCCGGTGGATTGGATTTCGGTGAACAAGCCCTGCGTCGGCGAGAGTTCTGACGGAGTCGCGATCTCTTTCAGGGAACAATCTTCCAGTTCCAGTCGTAAGGAGTCTTATTTGGTGGACAATTGCTATGGGAACAgtgaagaaaatgaaataatCTATTCAAGAGATGTGAAGCCTCTTATATCAGCTGTTTTTGAGGGCAATAATAGCACTATTATTGCAATTGGAGCAAGAGGGAGTGGAAAGACTCATGTAATTCAGGGTTCTACTGAAACACCTGGTTTGTCAGTGCTTGCTATCACTGAGTTCCTTTCAATGGCGGAGCAAAGTGGTAAAAATATTGCTGTATCATTCTATGAGGTTGATCATCAGGAGCATGCTGTTGatttactaaatcaagaacAATCAaccatttttgtttttgaagaCAGAGGGCGTCTTCTGTTTAAAGGGCTTTCTCAGATCCCTGTGAAATCCACTGCTGAGttccaaaaattatatttcactgCTTGTGCTGCTCGAAAGTCAGCCACGAAAAAGGGCAATGACCGGGCTCGTAGAAGCCATGTGGGATTAATAGTGCACGTCCTTTCGGATGCTGAAAGCAGAGAAACTGGTTATGTGGGCAAAATGAATTTTGTTGATTTGGCAGGTTATGAAGACGCTAGAAAGAAAAGTAGTGATAGTTCTTATCTTGTTGAGACTAATAAAATCAACAAGTCCATATATGCCTTATCAAATGTCTGCCATGCTTTGAGCACCAATGAAAGTCGTGTTCCCTATCGGGAAAGTAAACTTACAAGAATGTTACAGGACTCCTTGAGAGGGACTAGCAAAATTTTGATGGTTGTCTGCTTGGCAACCTTAGATTCGACAAAGAAAAGTGAAAACTGTTCAGCAAGACAAATTATGCTTACTTCAAGTAAGAGTCAGATGCTCAAGAGCGTATCTTCTACAGCAAAAAAATTAACTGCCTCTAGATCACATGTTGAAAAGAAAACTGCTGATGTTATAAAATCTGCACTAAAAGGAAGGAAATTATTTCATGAAGCAAGTCATTCTGCTAAAGCTGAGAAgGCAAAGTTGTCAAATACCAGTTCTACCTTCAAAACTTCAGTGGAGGAAGAGGAAAATTCCATTGCACAAGATACCAAAGCATTAGTGCCTTCACTACAGGATCATTCATTTCCAGATGCTAGGTTTCACATGGAACCCAAATCTATGGAGGAAAATGAAATCACAGTTTCAGATGCTAGATTTCAAGCAGAACCGGTGGTGAAAAAGGTTGTCAGTGAGGAAACTGAGGGTCATCAAGAGGAGCTTACTCCTAGATCTGACTCGAAAGCATTGTCTATAATAGACTCTACTGTTCAGGAAGGTCATAATATGAATAAGGAGAACGACAGTTTAATTGCCAATAATGCTGGATCACCACCTATTAGTGCCAAACTTCGTGAAATATCAAACAATTTGAAGTTTCTCCTTTCATCCACTCCACTATGTGTGAAGAAACCAGAAGAGGAATCCATATTACTTGACCTATCTTCTACTGATATTGTAGAGCCAAAAACTCCTATCACAGAACAAACTTTGAGAGTTAATGATAGGTGGGATGTTGCAAACACCAAAAGTCCTTGGGAAACATATAGCATGCGCAGTTCTGGAATGAAGAACTCGCTTGTTCAAGAATATCTCAAGTTCTTAAACACAGCTAACAAGGAAGAATTGAAAAGATTGAAGGGAATTGGCGAGAAAAGGGCAACCTTCATACTTGAACTTCGTGAAGAATCTCCCGAACCTTTCAAGAGTCTTGATGATTTAAAGGATATTGGACTTTCAGCAAAGCAGGTATCTCTCTTTTCCTTTGAGTATCTTCTTATATTGCAAAGGTTCCTGATAATCACCATTTTCCATTATGTGATTCTCAAGTTTCTTAATCTATATGAAGAGAATGGGTTTTTTGTAGTGCAATTTCCGTGA 2085 0.3938 MDWNHLKQSDCAKANSAGSNPLRKVRVVAKVRGCTDPVDWISVNKPCVGESSDGVAISFREQSSSSSRKESYLVDNCYGNSEENEIIYSRDVKPLISAVFEGNNSTIIAIGARGSGKTHVIQGSTETPGLSVLAITEFLSMAEQSGKNIAVSFYEVDHQEHAVDLLNQEQSTIFVFEDRGRLLFKGLSQIPVKSTAEFQKLYFTACAARKSATKKGNDRARRSHVGLIVHVLSDAESRETGYVGKMNFVDLAGYEDARKKSSDSSYLVETNKINKSIYALSNVCHALSTNESRVPYRESKLTRMLQDSLRGTSKILMVVCLATLDSTKKSENCSARQIMLTSSKSQMLKSVSSTAKKLTASRSHVEKKTADVIKSALKGRKLFHEASHSAKAEKAKLSNTSSTFKTSVEEEENSIAQDTKALVPSLQDHSFPDARFHMEPKSMEENEITVSDARFQAEPVVKKVVSEETEGHQEELTPRSDSKALSIIDSTVQEGHNMNKENDSLIANNAGSPPISAKLREISNNLKFLLSSTPLCVKKPEEESILLDLSSTDIVEPKTPITEQTLRVNDRWDVANTKSPWETYSMRSSGMKNSLVQEYLKFLNTANKEELKRLKGIGEKRATFILELREESPEPFKSLDDLKDIGLSAKQVSLFSFEYLLILQRFLIITIFHYVILKFLNLYEENGFFVVQFP 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2439 694 PANTHER KINESIN-LIKE PROTEIN KIN-10C 24 651 - -
Sto10g2439 694 Gene3D Kinesin motor domain 4 334 IPR036961 -
Sto10g2439 694 ProSiteProfiles Kinesin motor domain profile. 24 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 Pfam Kinesin motor domain 61 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 SUPERFAMILY RuvA domain 2-like 594 645 IPR010994 -
Sto10g2439 694 PRINTS Kinesin heavy chain signature 102 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 PRINTS Kinesin heavy chain signature 214 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 PRINTS Kinesin heavy chain signature 245 263 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 PRINTS Kinesin heavy chain signature 294 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 SMART kinesin_4 22 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto10g2439 694 Gene3D - 590 662 - -
Sto10g2439 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 325 IPR027417 -
Sto10g2439 694 Pfam Helix-hairpin-helix motif 603 646 - -
Sto10g2439 694 PANTHER KINESIN-RELATED 24 651 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2439 Sto-Chr10 34636067 34641429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2439 61 326 Calmodulin-binding Proteins AT5G65930 30.403 9.18e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2439 K10403 - gmx:100779826 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2439 10 34636067 34641429 Sto10g2439 10 34636067 34641429 ECH