Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2432 ATGCCAACTGCAAAACATAAGGTTTTTAGTACTTCAGATGTCATGAAAGCAGAGGACGGAAATGACCCGTTAGATACCATTATCAGGCAAGCAATTGGCAAAgaatctttcctttcttttccaaggGCCAGTGACAGTCCTGTTCAGTGGATTCAGTTACTTCAAGCATTAGATCAGCAAGAAGTACCGGGCTGGCCTTTGCTATCTCCTCCGAAAGTTCAGTTGCAGAAGTGTGACAAGTGTTCTCGAGAATTTTGCTCTCCAGTTAATTATAGAAGACATATACGTGTTCATCATCGGTTGAAAAAGATTGATAagGATTCTACAAAAAATAGAGATCTGTTAGGAGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTATCATTCAAGGATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAAAGGGCTGACTGCTCTTATTCGTAAACAAGGATTGGCTTCACTTCCGCAGTATTATCTGAAGGCTGGTTCCGCCCTTTTGGATATTGTTCAAGCTAGATCTTCCATTTTATCTATATCTTCCAAGGAGTTGTTTGGTATCCTTGATAGTGCCAGTGAAAAAACATTTCTATGTGGGTCAGCAGCATCGATgcaaaaatatgtttttgatGGAGAGCCAGAAAAGATTGGTCTTGATCCCAAAAACCTAATTGCTTGCACAAGTTTCTTACTGGAACAGAAATtgGTGAAGGCATGGCTTTCTGACAAGGAAGCTGAAGCATTGCGGTGCCAGAAACTGCTAGTGGAAGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGAAAACGCCAGAAAAAGCTTAGACAAAAAGAACAGAAGGCAAGGGAGCAAAAACTTGAGGAGAAGGCAGAAATTAAAGAGAATGGTAGCAGTACAGTAGCAGATGGCTCATCAACAGAAGCATCTCCTACATGCGACATTGAAGTACATAATCCAGTTACATTTGCAGATCATGTTCCTTTTCCACTTGTACCCTACCAGTACCCAGACACCAATGAAGGTGCAGATGGAGATTCTCAGTCAGCATATGATTGTGGAGCTGATCAGAACATTGAGCAACAGACATCCCAAGGACATAATCGTCGGCACATTGCGGTTGCTCAACCAAAATCACAATGGGCTGTAGCCAATGGTTTCCATGCAAGTCAGAACTCTCAAAGTTCCAAGCTTGGAGTCACTCAGAAGTATGGAATTCACCGCGATCAACGGGCTGCTCCTATACTTAATGGTAACAAAGTATGGAGCCGAAAGCCTAAACCAGAATTTGGTGGTGTAAATTCTAAAGTCAGACTGGAGAAAGAACCAGACCAAGGAAAGAGCCATGAAGTTTTGATAGGGTCTATATCTGTTACTCTTGGCAATTGCTGCCAATCAGAGGATAATCTGGTGGCATCTCGAGAGGACTGCACGATTGGGAATTTAACCAAGCATAATAGTGCTCAGGAAAAGCCAAATAAACATGATCTTAAGGCTGTTAAGCTTTGGAGGCCAGTTAGTCGAAATGGAACTAAACACCCATTGCCAGTTCAAAGTGGTGGCACAGAAGCTGATGCAATGGATGGGAAGAGAGATGATCAAAATTTGTCAGATCAAAGTTGTTTAAGGTTGTGTGACTTAGATTGTGATAGTGGGTTTGGGAATAACTCTTCCCTTCTGGAGGACAGAGTAGGTCCAGGAAGTTTACAGCTATCCAGTCATGCTGCAAAAGCCTTTCTTGCAGAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAAATTGGTTCTTTCACCAAACTCTGAACCTCCTGGGCACCAGGAGACACAGGAATGTGAACAAGCAGCATATCGATCTTCGAATGGTGACAAATGTGGCATTCTTGCAAGTGCAGATAATCAGTTGTCTGCAACCTCTGGAGCAGCTAAATCCAAAGCTAGAATGAAGCCCGAAAAGGGTATCAAGATAAAGTACATTCCCAAACAAAGAACAGCTACCTag 2028 0.4167 MPTAKHKVFSTSDVMKAEDGNDPLDTIIRQAIGKESFLSFPRASDSPVQWIQLLQALDQQEVPGWPLLSPPKVQLQKCDKCSREFCSPVNYRRHIRVHHRLKKIDKDSTKNRDLLGAYWDKLSVEEAKEVVSFKDVMLEEVPGSSILKGLTALIRKQGLASLPQYYLKAGSALLDIVQARSSILSISSKELFGILDSASEKTFLCGSAASMQKYVFDGEPEKIGLDPKNLIACTSFLLEQKLVKAWLSDKEAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQKLEEKAEIKENGSSTVADGSSTEASPTCDIEVHNPVTFADHVPFPLVPYQYPDTNEGADGDSQSAYDCGADQNIEQQTSQGHNRRHIAVAQPKSQWAVANGFHASQNSQSSKLGVTQKYGIHRDQRAAPILNGNKVWSRKPKPEFGGVNSKVRLEKEPDQGKSHEVLIGSISVTLGNCCQSEDNLVASREDCTIGNLTKHNSAQEKPNKHDLKAVKLWRPVSRNGTKHPLPVQSGGTEADAMDGKRDDQNLSDQSCLRLCDLDCDSGFGNNSSLLEDRVGPGSLQLSSHAAKAFLAERWKEAISSNHVKLVLSPNSEPPGHQETQECEQAAYRSSNGDKCGILASADNQLSATSGAAKSKARMKPEKGIKIKYIPKQRTAT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2432 675 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 674 - -
Sto10g2432 675 SMART c2h2final6 76 98 IPR013087 -
Sto10g2432 675 MobiDBLite consensus disorder prediction 647 675 - -
Sto10g2432 675 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Sto10g2432 675 MobiDBLite consensus disorder prediction 279 305 - -
Sto10g2432 675 MobiDBLite consensus disorder prediction 516 542 - -
Sto10g2432 675 Coils Coil 266 305 - -
Sto10g2432 675 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Sto10g2432 675 MobiDBLite consensus disorder prediction 279 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2432 18 672 C2H2 Transcription Factor Family AT4G25610 44.127 2.80e-153 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto10g2432 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2432 - - gmx:100799153 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2432 10 34610759 34617627 Sto10g2432 10 34610759 34617627 ECH