Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2423 TTGAAGCTCAAAATCACAAACAAGAGCCATGTGAAGCCAAAGAAGAAGCTAGGCAAGAAAGAATGCCAACTAGTGACATTTGACCTTCCCTACCTTGCCTTCTACTACAACCAAAAGCTTCTCTTCTACAAAGGCCAAGACTTTGAAGGGATGGTGAGGAAGCTCAAGGAAGGGCTTGGTGGGGTTTTGGAGGAATTCTATGAGCTTGCTGGTAGGCTTGAGAAGGATGAAGATGGGGTTTTCAAAGTGGTGtatagtgatgatgatgatgaagatgaagataatGGTGGTTTTGTGGGTGTGGAAGTTATTGAAGGTGTGGCTGATGGGGAGATTGGAGTGGAAGATCTAACGGTGGCAGAGACATCAAGCAACTTGAAGGAGTTGATTCCTTATGGTGGGATCCTCAATTTGGAAGGCATGCATAGGCCATTGTTGGCAATTCAGTTAACCAAGCTAAAAGACGGACTCGCACTGGGATGCGCGTTTAACCACGCGGTCCTTGACGGCACCGCCACGTGGCACTTCATGAGCTCATGGGCTGAAATTTGCAATGGCGCGCCTTCGGTTTCGATCTCACCCTTCCACGAGAGAACCAAAGCACGAAACACGCGTGTGAAGCTCGACCTCTCACTCCCCTCTGACACACGTGCCACATCCAACGGTGATGCCAAGCCGGACCCACCACTGAGAGAGAAGATCTTCAAGTTCTCTGAGTCAGCCATTGACAAGATCAAGTCAACGGTCAACGGAACCCTTCCATCGGACGGCTCAAAACCATTCTCCACCTTTCAATCCCTCTCCGTCCATATTTGGCGCCATGTAAGCCATGCACGTAACCTAAAACCCGAAGACTACACTGTTTTCACTGTCTTCGCCGACTGTCGAAAAAGAGTCAACCCGACGATGCCAGAGAATTACTTTGGAAACCTAATCCAGGCCATATTCACGGTCACGGCGGCCGGATTGCTGTTGTCTCACCCGCCAGAATTCGGGGCATCCCTAATTCAGAAGGCCATTGAAGCCCACGATGCTAAGGCTATTGATGAGCGAAACAAGGAGTGGGAGAGTGCACCAAAGATTTTCCAATACAAAGATGCTGGGGTGAACTGCGTGGCTGTCGGAAGCTCGCCGAGGTTCAAAGTTTATGATGTGGATTTCGGGTGGGGGCAGCCGGAGAATGTGAGGAGTGGATCGAATAACAAGTTCGATGGGATGGTTTATTTGTATCCAGGGAAGAGTGGAGGAAGGAGCATTGATGTGGAGCTGACCTTAGAGCCAGAGGCTATGGAGAGGTTAGAGAAAGACAAAGAATTTCTCATGGAGGTTTAA 1332 0.4842 LKLKITNKSHVKPKKKLGKKECQLVTFDLPYLAFYYNQKLLFYKGQDFEGMVRKLKEGLGGVLEEFYELAGRLEKDEDGVFKVVYSDDDDEDEDNGGFVGVEVIEGVADGEIGVEDLTVAETSSNLKELIPYGGILNLEGMHRPLLAIQLTKLKDGLALGCAFNHAVLDGTATWHFMSSWAEICNGAPSVSISPFHERTKARNTRVKLDLSLPSDTRATSNGDAKPDPPLREKIFKFSESAIDKIKSTVNGTLPSDGSKPFSTFQSLSVHIWRHVSHARNLKPEDYTVFTVFADCRKRVNPTMPENYFGNLIQAIFTVTAAGLLLSHPPEFGASLIQKAIEAHDAKAIDERNKEWESAPKIFQYKDAGVNCVAVGSSPRFKVYDVDFGWGQPENVRSGSNNKFDGMVYLYPGKSGGRSIDVELTLEPEAMERLEKDKEFLMEV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2423 443 MobiDBLite consensus disorder prediction 210 229 - -
Sto10g2423 443 Gene3D - 1 210 IPR023213 -
Sto10g2423 443 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 6 439 - -
Sto10g2423 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 439 - -
Sto10g2423 443 Pfam Transferase family 2 439 - -
Sto10g2423 443 Gene3D - 212 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2423 Sto-Chr10 34520214 34524007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2423 1 443 Monolignol Biosynthesis Gene Families AT5G48930 26.609 1.30e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2423 K19747 - gmx:100790669 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2423 10 34520214 34524007 Sto10g2423 10 34520214 34524007 ECH