Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2417 ATGGGTATTGGTAGAGCAGGTTATGTAAGAAATGAGGAGGCAACAGCTGAAACATTGGATTCAGAGGGATGGCTGAAGACTGGTGatctttgttattttgactctgaTGGTTTCCTCTACATTGTAGATAGGCTTAAGGAATTGATCAAATACAAAGCTTATCAgGTTCCTCCAGCTGAATTGGAACATATTCTTCACACCAATCCTGCTGTAATTCCGTATCCTGATGAAGATGCAGGGCAAATCCCAATGGCTTTTGTGGTAAGAAAGCATGGAAGCAATATTACTGCACCTCAAGTAATGGATTTTGTCGCAAAGTTGGCTaatttgctaaatatagatggCTCATGCGTGAACAATCCTGTGATCATAGCAACTATAGGAATCATCATTAGGGACAATAAGAACTCTTGGATTAAAGGCATTGCATCTCAACCTTTGCTAGCTAAGGAATGGCGACACATAGAAGTTGGTGGATCACCCCTAAATACTCATCGTGGGTTTGTTGTTGAATATGGTAAAGATAAAGATGTTGTCTCAGGTATCTTTTCTGCttga 558 0.3763 MGIGRAGYVRNEEATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPAVIPYPDEDAGQIPMAFVVRKHGSNITAPQVMDFVAKLANLLNIDGSCVNNPVIIATIGIIIRDNKNSWIKGIASQPLLAKEWRHIEVGGSPLNTHRGFVVEYGKDKDVVSGIFSA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2417 185 Gene3D - 5 46 IPR042099 -
Sto10g2417 185 Pfam AMP-binding enzyme 7 51 IPR000873 -
Sto10g2417 185 Gene3D - 47 118 IPR045851 -
Sto10g2417 185 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 107 - -
Sto10g2417 185 PANTHER 4-COUMARATE--COA LIGASE-LIKE 7 6 107 - -
Sto10g2417 185 SUPERFAMILY Acetyl-CoA synthetase-like 6 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2417 Sto-Chr10 34413182 34416868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2417 7 106 Monolignol Biosynthesis Gene Families AT5G63380 75.238 5.57e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2417 K01904 - gmx:100777435 186.422