Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2414 ATGTCGTCGCCGGGATTTACGGGCGGTGGAGCGCCGGAGTTCTACGGCGGAGCCGGCCGATCATCATTCACGGCGGCCACCATGAACGACCCCACCAACACCAACCTTCACCACGCtaatcaacaacaacaactcCATCATCATAATCATCTTCCGCTGTACCGAACTCAGCAGCAACAACTTCCGCCGATTTTTCTAGATCCTTACACGCAGATCGCGAGGCAGAATCCGAGCCTCGTCGGGAAGAGGACGCTGGCGGAACTCCAATCCCACCAGAATCATCACAACAATCAGGTGCTCTCGAATCTTCTGCTGCGCTCCGTGAAGCCCAGGACCTTCCAGAATAGTTCTCCCGTGTCCCCTATGTCGCCCATGGATTTCTCCATGTCGCCTGAATTGCCGAACTCGTCTTCGTCGTCGTCATCGGTTTTTCCGTCGCAGCGGTTTGGGTTGCCTTTTCTTCACCAGCAATCGCGCCCTCAGACGATGAATCTCCCGACGAACACGGTCTTGCCGATGGGGAATTCTGCGCTGCACAGGGCGGCGGGTTTTCAGTATTCGAATAACGCTAATAATTTGGTTCAAGTTCAGGAATCTGAGAAGATGGTGATGGACCATCGGCTTCAGGAGTTGGAGAAGCAGCTTCTGGAAGACAACGATGAGGAGGAAGGAGATGCGGTTTCTGTGATTACCAACAGCGAGTGGTCCGAGACGATACAGAATCTGATCACTCCCGCACTTCAGAAGCCCATTTCGTCCTCGCCTACGTCGTCCACGACCTCGACGACGTCGTCTTCCTCCTCCGTTCCCTCCCCTGCTTCCACCTGTTCCAAGCAGTCGCTAATGGAGGCCGCATCTGCGATTTCCGAAGGCAAATCGGAGTTCGCGACGGAGATCCTCGCGCGTCTCGCTCCCGTCTCGAATCCGAACGGGAATTCCGATCAACGGCTGACGGATTGTATGGTCTCGGCGCTGAAATCGCGCGTGAGCCCTCACGAAAACCCTCCTCCTGTGGTGGAACTCTTCAGCACCGAACACGCCGAGTCGACTCAGCTTCTCTTCGAGTATTCCCCCTGCTTCAAGCTCGGTTTCATGGCGGCCAATCTCGCAATCCTCGAAGCCACATTCGAAGACATGCCAGAGAACGGCAATATCAACAACAACAAGAAGCTCCGCGTGCTTGATTTCGACATCGGGAAGGGAAACCAGTACATAAACCTCCTCCACGCCCTCTCCGCGCGTCAGAACGGGAAATCCGTGACGGTGAACATCACGGCGGTGGCGGAGAAGGGCGGCGAAGAGAGGCTGAAGACGGTGGGAGACATGCTGAGCCAACAAGCAGTGCGACTCGGCGTGGGATTCGAATTCAACGTCGTCTCGCTGAATCAAAACCTCACCGAGTTGACTCGCGAGTCACTGGGCTGCGAGGAAGACGAAGCCCTCGCGGTGAACTTCGCCTTCAAAATGTACAGAATGCCCGACGAGAGCGTCTCGACGGAGAACCCACGGGACGAGCTCCTCCGGCGCGTGAAGGGTCTCTCCCCGCGCGTGGTGACGCTGGTGGAGCAGGAGATGAACACCAACACGGCGCCGTTTTTGTCCCGCGTGGCCGAGTCGTGCTCCTACTACGGCGCGTTGTTCGACTCGCTGGAATCCACAATGCCGAGGGAGAACTCGGACCGAGTCAAGGTCGAACAGGGGCTGAGTCGGAAGATGAGCAACTCGGTCGCGTGTGAGGGAAGGGATCGCGTGGAGAGATGCGAGGTGTTCGGGAAGTGGAGGGCGCGTATGGGCATGGCGGGATTCCAATTGAAGGGAATGAATCAGCGAATCGCCGAGTCAATCAAAGCGAGACTGAGTCAAGGGAACCGAGTCAACCCGGGTTTCACAGTGAAAGAAGAGAATGGTGGGATTTGCTTTGGGTGGATGGGTCGAACACTCACCGTCGCATCTGCTTGGCatATTGTAATATCCAATTGTTACTATATTATAACGTTATCTAGAGATAATGGAAAGGCAAAGCGAACATATTTGGAAATTTGA 2043 0.5512 MSSPGFTGGGAPEFYGGAGRSSFTAATMNDPTNTNLHHANQQQQLHHHNHLPLYRTQQQQLPPIFLDPYTQIARQNPSLVGKRTLAELQSHQNHHNNQVLSNLLLRSVKPRTFQNSSPVSPMSPMDFSMSPELPNSSSSSSSVFPSQRFGLPFLHQQSRPQTMNLPTNTVLPMGNSALHRAAGFQYSNNANNLVQVQESEKMVMDHRLQELEKQLLEDNDEEEGDAVSVITNSEWSETIQNLITPALQKPISSSPTSSTTSTTSSSSSVPSPASTCSKQSLMEAASAISEGKSEFATEILARLAPVSNPNGNSDQRLTDCMVSALKSRVSPHENPPPVVELFSTEHAESTQLLFEYSPCFKLGFMAANLAILEATFEDMPENGNINNNKKLRVLDFDIGKGNQYINLLHALSARQNGKSVTVNITAVAEKGGEERLKTVGDMLSQQAVRLGVGFEFNVVSLNQNLTELTRESLGCEEDEALAVNFAFKMYRMPDESVSTENPRDELLRRVKGLSPRVVTLVEQEMNTNTAPFLSRVAESCSYYGALFDSLESTMPRENSDRVKVEQGLSRKMSNSVACEGRDRVERCEVFGKWRARMGMAGFQLKGMNQRIAESIKARLSQGNRVNPGFTVKEENGGICFGWMGRTLTVASAWHIVISNCYYIITLSRDNGKAKRTYLEI 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2414 680 Coils Coil 194 214 - -
Sto10g2414 680 MobiDBLite consensus disorder prediction 112 143 - -
Sto10g2414 680 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 74 654 IPR005202 -
Sto10g2414 680 MobiDBLite consensus disorder prediction 246 276 - -
Sto10g2414 680 PANTHER SCARECROW-LIKE PROTEIN 8 74 654 IPR030013 -
Sto10g2414 680 ProSiteProfiles GRAS family profile. 268 654 IPR005202 -
Sto10g2414 680 Pfam GRAS domain family 278 653 IPR005202 -
Sto10g2414 680 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2414 Sto-Chr10 34363159 34365289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2414 56 654 GRAS Transcription Factor Family AT5G52510 51.987 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto10g2414 GRAS 3e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2414 - - tcc:18605613 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2414 10 34363159 34365289 Sto10g2414 10 34363159 34365289 ECH