Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2409 ATGGATAACATGGCTTGTAATAAAGGGCAACATGTGAGGAAGGCAAAGAAGAAGCCGGTGAAAGATGAGTTGGATCGACTGAAACAGgctgagaagaagaaaaggcgCTTGGAAAAAGCACTGGCTACTTCTGCAGCCATCATTTCAGAACTGgagaaaaagaaacagaaaaagaaagaagaacaacAGAGACTTGATGAAGAGGGTGCTGCTATTGCCGAGGCTGTTGCTTTGCATGTTCTACTCGGCGAAGACTCAGATGATTCAAGTAAAGCTATGAATGATGGGGGATGCAAGCCCTGGAACTGCAGTAGTGACCTTGATCTCTTCCTTGGCGGAAAACGAGCTTGCTTTCCTCATCTAGATGGTGGCACATGGTCTGTGGAAAGAATGGGGTGGGTCTCTGATGCATTCAGCTATGGCTGCAAGTTGGGTGGAGCTGAAAATGGCAAGTGGTCTTTCTCGTTCGGACCGGTCGAAAAGAATGTGATCGAACCACTATATGAGGAAGCTGGATGGGGGCCTGATGGATTTTCTGCTGATCTTATTGCAGCACAAGCAGTTTCATCACTTCAGATTGCAGAAGATGcagatgaagaagaaaggCTTGTGCCGAAGATCGTCATCGTCGTCAAAAGAAGCTGTGACAGAACAGAGGCGCCATTTTCGCAGCTTCTCATTCATAGGCTCCAATGTTATTCAACTCTGCTCGAGTCCCTCGATGCTGTGAATGTGAATCTTGATGTTCTTCAGATTATTGAGAAGTACTATGTTCATTCGGCATTGGAGAAAATGGTGTCGAGTCAATGCCACGGCGGGAGGATGGTGGTGGCGCCGTGGAAGACTCTGTTTTTGAGTTGTAGGTTTTCGCCTGCGATGTTCAGTGGGTTCACGGAGGCGCAAGCAGAGTGTTTGGTTCAGAGGAGTCATGCGAGAAGGCTTCATGTGGAGAAGAGGCAGGGTTCATTGCTTGCGATGACGGAATCCTCTTCAGTCCTTTCTCCTCCATCTCTCTCCTTAGAGTTGACACACTCAGCCACCTTCCAGCTGCAGAATGTGCATTTGACAGCATCACATATGAGGATACATCATCAGGATCCAAAGCCAAGATCTTTCTTGCTGCAAGTTCTCCCAATTCCATGTTTGAGTGAATTTGGCATCCCCCGAGCAATGCCTTCCAAAACCCGATTCCCGGGTCGAAAGGCATATTGTGAAGGAAGCCCTCGGCTTCTGAAGTTTATTGAACATCAAGATGCTATCTTCCATGTTTCCACACTTTGCATAGAAGCTAATAAGAGAAGTACCAACAAACACATCAAGCTTACCCAAAATCTTTACTGCACATGCATGAAAACTTCTTCCAATCCCAAATGCTGCTATATTGGCAGCTGCAGAAATAGCACAAGGAAATGTAGATTCATTAGGCATGACCTGGAAAAGCTGCATAGCATCAATAAACCTCCCTCTCTTCAAGTACCCACAAATCAGAGTTGTGCAGGACACCACATTGGGATGTTTGCTAAGAGTAAAGATGTGGAATTTGATCCACGAAGGTTGTGA 1560 0.4436 MDNMACNKGQHVRKAKKKPVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAIAEAVALHVLLGEDSDDSSKAMNDGGCKPWNCSSDLDLFLGGKRACFPHLDGGTWSVERMGWVSDAFSYGCKLGGAENGKWSFSFGPVEKNVIEPLYEEAGWGPDGFSADLIAAQAVSSLQIAEDADEEERLVPKIVIVVKRSCDRTEAPFSQLLIHRLQCYSTLLESLDAVNVNLDVLQIIEKYYVHSALEKMVSSQCHGGRMVVAPWKTLFLSCRFSPAMFSGFTEAQAECLVQRSHARRLHVEKRQGSLLAMTESSSVLSPPSLSLELTHSATFQLQNVHLTASHMRIHHQDPKPRSFLLQVLPIPCLSEFGIPRAMPSKTRFPGRKAYCEGSPRLLKFIEHQDAIFHVSTLCIEANKRSTNKHIKLTQNLYCTCMKTSSNPKCCYIGSCRNSTRKCRFIRHDLEKLHSINKPPSLQVPTNQSCAGHHIGMFAKSKDVEFDPRRL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2409 519 PANTHER OS02G0104200 PROTEIN 1 204 - -
Sto10g2409 519 MobiDBLite consensus disorder prediction 1 38 - -
Sto10g2409 519 PANTHER OS02G0104200 PROTEIN 1 204 - -
Sto10g2409 519 MobiDBLite consensus disorder prediction 16 38 - -
Sto10g2409 519 Pfam GRAS domain family 202 324 IPR005202 -
Sto10g2409 519 Coils Coil 20 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2409 Sto-Chr10 34329553 34337833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2409 201 324 GRAS Transcription Factor Family AT4G00150 45.968 3.45e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto10g2409 GRAS 1.1e-14 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2409 - - gmx:102660562 317.39