Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2368 ATGGTttccaaaaacccaaaccctccaGAGGGTTTCTACTTGGATCCTAGTGGGATGGCGCTTCCTGGCCTCGGTCCCTTCGCCTCCGTGACGGCGGCATCGGCGACGGCGGCAACGACGACGACGGGTTCCAATTCTAATTCGTCGGCGGAGGACCTCGCGAAGAAGATCCGGAAACCGTACACTATTACCAAGTCCAGGGAGAGCTGGAGCGAACCCGAGCACGACAAGTTTCTTGAAGCTCTTCAACTCTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATACAGATACGTAGCCATGCACAAAAATACTTTCTAAAAGTTCAGAAGAGCGGAACAAATGAACATTTACCTCCACCCAGGCCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCCAAAAATGCTCTGGCACTCACTCAATTATCAGGATCctttcaatcttcatctcctttgcTTGAACCTGGATATGTACTAAAGCCCAATTCCTCTGCAATGGTCAAAACTCCGGTTACTAATGCTGCAGTGTCTTCTTGGTCAAATAACACATTACAGACAACCAGTTTATTGCATGGTACAAAAGCCCCAAGAGTGAACAATTGTTGCAGTAGCAGTGAAAGCACTCATAAAGCACACCCTGTTGGTGAATCTACTGGTCAAGGGAATAATAGCCATCCTTTGAGAGGCAAGGCTTTGATTACCTTCCTTATTAATTTCTCCTTTATATGGATGGTTGGATTTCTTCCGGATTTTGCACAAGTATACAACTTCATTGGCAGTGTTTTTGACCCAAATGTCACTGGCCATCTGCAGAAACTAAAAAAGATGGACCCTATTGATGTTGAGACgGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTATCAAGCCCTGATTTTGAGGATCATGTAAGTATTCAAGTCACTAGTCTTTAA 963 0.4226 MVSKNPNPPEGFYLDPSGMALPGLGPFASVTAASATAATTTTGSNSNSSAEDLAKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNALALTQLSGSFQSSSPLLEPGYVLKPNSSAMVKTPVTNAAVSSWSNNTLQTTSLLHGTKAPRVNNCCSSSESTHKAHPVGESTGQGNNSHPLRGKALITFLINFSFIWMVGFLPDFAQVYNFIGSVFDPNVTGHLQKLKKMDPIDVETVLLLMRNLSINLSSPDFEDHVSIQVTSL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2368 320 PANTHER SWI/SNF COMPLEX-RELATED 3 314 - -
Sto10g2368 320 CDD SANT 69 112 IPR001005 -
Sto10g2368 320 ProSiteProfiles SANT domain profile. 65 116 IPR017884 -
Sto10g2368 320 Gene3D - 70 117 - -
Sto10g2368 320 PANTHER PROTEIN REVEILLE 6 3 314 - -
Sto10g2368 320 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Sto10g2368 320 MobiDBLite consensus disorder prediction 209 232 - -
Sto10g2368 320 SMART sant 66 114 IPR001005 -
Sto10g2368 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto10g2368 320 MobiDBLite consensus disorder prediction 116 141 - -
Sto10g2368 320 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 65 114 IPR006447 GO:0003677
Sto10g2368 320 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2368 Sto-Chr10 33865391 33870238 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto10g2368 Myb_DNA-binding 1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2368 - - jre:109010831 441.039