Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2341 atgtTTTCCTTTTCCAATACATTTTCAACCTTCAAATCAGCGCTCGCAAGATTAACCTCATTCTTCGGTCTTCCTCTATGGATTCTGCTCCTATCTTTCGCCGCAGCCTTCTTCGCCGCCGCGATCTTCCTCACACTCTGCATCTGCTTCATCCGCTACCGCATTCATCGAAAACCCTACAAATTCCAGTCCTCTTTGCCCAAATCGATTCCTTCTCAGCAATTCCGTCGTCGTCGTGATTCCAGCTCGTTCTCTCTTGACAATAGGCTACTCTTAGGCAATAATAGTGATAATATTGTCTCTGGATTAATTCCGATGAACTCTGAAGTTTCCTCACAGGTCGAAGTTGACGTTGAGGAAGATGGAGATCGGAGAGATTTGGAATCTTCTGGTAGGTTTTCTCGGGGGATTAAGAAGAGTAGGTTCAGTGTGGAGGTGATCGAGGAGGCTACGAATGGATTTGCAGAAGAAAATTTGATCGGAATTGGGGATCATGGAATTGCTTATTTTGGTTTGTTAACTGATAGTAATTCTCGTGTGGTAGTGAAGAGGCTAGCAAGTGACAGTTGCCACATTGAGGATTTTACGTTGCAAATGGAGGCAGTTGCACATGTAAAACACAAGAAACTGGTGAAGTTgattggatattgtaatgaggGAGCTTACAGGATGTTAGTATCTGAATACATAGATAATGGAAATCTGCATCAGTGGCTTCATGAATTTCCTGGACAAGTCAGCCCTCTAACATGGGATCTAAGGTTGAAGATTATCAAAGGTGTAGCAAAAGGATTGGTCTATCTTCATGAGGATGTTGAACCAAAAATTCTCCATGGAAGCCTAAAATCTAGCAATATATTGCTTGATCGCCAATGGAATCCTAAGATCTCTGACTTTGGCATTGCTAAGCTTTTCACGGCTGATTTGAATATGACAGAAACATTGGGGAACGTATTTCCAGATTGTTATTCCACAGGCATTTCTACTGAAAGCAATGACATTTATTGCTTTGGAATACTTATAATGGAGATTGTATCAGGGAGGACTCCTTTAAATCACAATCAACCCCAGGCATATATAGTTGACTGGTTTAAGTCCATAATTGCCAATGGAAATATTGACTACCTGGTGGACTCAAAACTGCCTGAAATGCCTCCTTCCAAGGAACTTAAACAATTGATTTTGGTTTCTCTTAGATGTGTAGATCCttctctgaaccctaaactaaaCATGGGAGATGTCATGCGCATGCTTGAGCAACCTGACCTGCTTCTTTCTGATGAACACCAAATTGTTAGGGAGGCTTATGAGCATAACCATTCTCCAGTCCAGCGTCAGAATGCATCAGAATTTGGAGATAGTCGTCCAGAGAGAAATAGAAGGCTAAGCAGCAGCAATCAGTACCAGAACATGGCACAAAAATAA 1425 0.4063 MFSFSNTFSTFKSALARLTSFFGLPLWILLLSFAAAFFAAAIFLTLCICFIRYRIHRKPYKFQSSLPKSIPSQQFRRRRDSSSFSLDNRLLLGNNSDNIVSGLIPMNSEVSSQVEVDVEEDGDRRDLESSGRFSRGIKKSRFSVEVIEEATNGFAEENLIGIGDHGIAYFGLLTDSNSRVVVKRLASDSCHIEDFTLQMEAVAHVKHKKLVKLIGYCNEGAYRMLVSEYIDNGNLHQWLHEFPGQVSPLTWDLRLKIIKGVAKGLVYLHEDVEPKILHGSLKSSNILLDRQWNPKISDFGIAKLFTADLNMTETLGNVFPDCYSTGISTESNDIYCFGILIMEIVSGRTPLNHNQPQAYIVDWFKSIIANGNIDYLVDSKLPEMPPSKELKQLILVSLRCVDPSLNPKLNMGDVMRMLEQPDLLLSDEHQIVREAYEHNHSPVQRQNASEFGDSRPERNRRLSSSNQYQNMAQK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2341 474 SUPERFAMILY Protein kinase-like (PK-like) 140 424 IPR011009 -
Sto10g2341 474 ProSiteProfiles Protein kinase domain profile. 154 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2341 474 PANTHER BNAC04G54280D PROTEIN 9 444 - -
Sto10g2341 474 Gene3D Transferase(Phosphotransferase) domain 1 230 440 - -
Sto10g2341 474 PANTHER OS01G0323000 PROTEIN 9 444 - -
Sto10g2341 474 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Sto10g2341 474 Pfam Protein kinase domain 155 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g2341 474 MobiDBLite consensus disorder prediction 437 474 - -
Sto10g2341 474 Gene3D Phosphorylase Kinase; domain 1 116 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2341 Sto-Chr10 33639920 33645105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2341 138 419 Trihelix Transcription Factor Family AT5G38560 34.797 1.70e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto10g2341 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2341 - - zju:107414750 392.889