Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2316 ATGGAGCAGAAGGGCGTTTTGTTCTCGGCATTGGGTGTGGGAGTCGGGTTGGGCGTCGGGCTCGGGTTGAGTTCGGGTCAGGCCGTGCAGAGGTGGGTCGGAGGAGGGAATCGGGAGCCCGGGGAGGTTTGTGTGGAGTCGATTGAGCAGGAGTTGTTCAGGCAGGTCGTTGATGGGCAAAGGGACAGTAAAGTAGTCACATTCGAGAACTTTCCTTATTACTTAAGTGAAAGAACTCGAGTGTTGTTGACAAGTGCCGCATTTGTTCATTTAAAACAATATCACTTTTCACAGCACACCCGAAACCTTTCACCAGCAAGCCGGACTATTTTGCTTTCTGGACCTTCAGAACTTTACCAGCAAACACTTGCCAAAGCTTTAGCACATTACTTTGAATCGAAGTTGCTTTTGCTAGATATTACTGACTTCTCTTGGAAGATGAAAAGCCGATATGGATGGACAAGAAAAGAACCATCTTTTAAAAGGTCCATATCTGAGCTGACTTTGGAGCGAATGTCAAGTTTGTTTGGTTCTTTTTCAATCACCTCGACCGGCGAAAATAGAGGAGCTTTACGTCGACAAACCAGTGCTACCGAAGGTTCCAATAATCCTCCAAAGCTACGTAGGAACGCCTCTGCTGCATCTGATATAAGTAGTGCTTCTTCCCATTGCGGACCAACAACTTCAGGTCCCCTGAAGCGCAAAAGCAACTTATGCTTTGATGAAAAACTGTTTCTGCAGGCACTTTACAAGGTCTTGCATTCTATCTCGGACACCAGTCCCATCATCCTGTACATCAGGAATGCTGAGAAGCTTTTTCTTGAATCGCCAAGATTATACAATTTGTTCCAAAGATTGTTGAAGAAACTTTCAGGGTCAGTGCTGatactaggttcccatattctTGATTCAGAAGATGATTGCAGAGAAGTTGACGAGAGGCTCACTGCATTGTTCCCTTACACTGTTGAGATACAACTGCCTGAAGACGAGACTCAACTCAGCAACTGGAAAACCCAGTTGGAAGAGGACATGAAAGTGCTTCAGTATCAAGATAACAGAAACCACATTGCTGAAGTACTTTCCTCAAATGACATTGAATGTGATGACTTGAACTCATTCTGCCATGCAGACACAATGCTCCTCAGTCAATACATTCAAGAAATTGTGGTGTCTGCAATATCTTACCATTTGATGAGTAACAAGAATCCAGAATACAGAAATGGAAAGCTAATTATATCATCTAAGAGTCTGTCCCATGGATTGAGTCTGTTCCAGGAAAGAAAAACTAGTGGGAATGATAATCTGATGCTGGAGACTAATGGATCTAACAAGGACACTGCTGGAGAAGAGAGTAGTGGTGCAAAGAATGACGTACGTGCTGATGCCCAAGCTCCTGAAAAGAAAAGTGAGACAGAAAAACCTATCACTATACCGAAAAAAGATGGCGAGAATTCTGCTCCTGCTAAAGCTGAAGTTCCTCCTGACAATGAGTTTGAGAAGCGAATAAGACCCGAGGTTATCGCCGCAAATGAGATAGGGGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAGGAGTCACTTCAAGAGATGGTCATGCTTCCCCTTCGAAGACCGGACCTCTTCAAAGGTGGTCTTCTTAAGCCTTGTAGAGGTATATTGCTTTTTGGGCCCCCAGGTACTGGAAAAACAATGATGGCAAAGGCAATTGCTAATGAAGCTGGAGCAAGCTTCATCAATGTATCAATGTCGACAATCACTTCGAAGTGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTTTGTTCACTTTAGCAGCAAAGGTTGCCCCCACTATAATCTTTGTTGATGAAGTTGACAGTATGCTTGGACAGCGAACAAGAGTTGGAGAGCATGAGGCGATGAGGAAGATAAAAAATGAATTCATGACCCACTGGGATGGGCTATTGACAAAACCTGGTGAGCAGATTCTTGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATAAGAAGGTTTGAGCGCAGAATTATGGTTGGTCTTCCATCGGTTGAGAACAGGGAAAAGATCTTGAAAACTCTCCTATCTAaggaaaaatatgaaaatatagaCTTCAAAGAGCTTGCAACCATGACTGAAGGATTTAGTGGAAGTGATCttaaggttttattttattattattattattattttttcggTTTCCCATTAAATTTATGCATGACGGCTGCATATCGACCTGTTAGGGAGCTGATGCAGCAGGAACTATTGAAGGAGAGGgaaaagaagaaaaaagaggcaGAAGCCAAAAGCTCGGAAGATGCTTCAGAGACTAAAGAGGAGAAAGACCATGTAATTACTCTGAGGCCTTTGAACATGGAAGACATGAAATATGCCAAGACTCAGGTTGCTGCAAGTTTTGCTGCAGAAGGATCAACAATGAGTGAGCTGACACAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAGCAGCAGCTCTCTTACTTCCTCTAG 2532 0.4214 MEQKGVLFSALGVGVGLGVGLGLSSGQAVQRWVGGGNREPGEVCVESIEQELFRQVVDGQRDSKVVTFENFPYYLSERTRVLLTSAAFVHLKQYHFSQHTRNLSPASRTILLSGPSELYQQTLAKALAHYFESKLLLLDITDFSWKMKSRYGWTRKEPSFKRSISELTLERMSSLFGSFSITSTGENRGALRRQTSATEGSNNPPKLRRNASAASDISSASSHCGPTTSGPLKRKSNLCFDEKLFLQALYKVLHSISDTSPIILYIRNAEKLFLESPRLYNLFQRLLKKLSGSVLILGSHILDSEDDCREVDERLTALFPYTVEIQLPEDETQLSNWKTQLEEDMKVLQYQDNRNHIAEVLSSNDIECDDLNSFCHADTMLLSQYIQEIVVSAISYHLMSNKNPEYRNGKLIISSKSLSHGLSLFQERKTSGNDNLMLETNGSNKDTAGEESSGAKNDVRADAQAPEKKSETEKPITIPKKDGENSAPAKAEVPPDNEFEKRIRPEVIAANEIGVTFADIGALDEIKESLQEMVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILKTLLSKEKYENIDFKELATMTEGFSGSDLKVLFYYYYYYFFGFPLNLCMTAAYRPVRELMQQELLKEREKKKKEAEAKSSEDASETKEEKDHVITLRPLNMEDMKYAKTQVAASFAAEGSTMSELTQWNDLYGEGGSRKKQQLSYFL 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2316 843 MobiDBLite consensus disorder prediction 451 480 - -
Sto10g2316 843 ProSitePatterns AAA-protein family signature. 658 677 IPR003960 GO:0005524|GO:0016887
Sto10g2316 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 736 IPR027417 -
Sto10g2316 843 MobiDBLite consensus disorder prediction 766 788 - -
Sto10g2316 843 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 843 - -
Sto10g2316 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 344 IPR027417 -
Sto10g2316 843 Gene3D - 514 686 IPR027417 -
Sto10g2316 843 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 843 - -
Sto10g2316 843 MobiDBLite consensus disorder prediction 433 498 - -
Sto10g2316 843 CDD AAA 553 686 - -
Sto10g2316 843 MobiDBLite consensus disorder prediction 187 230 - -
Sto10g2316 843 SMART AAA_5 551 688 IPR003593 -
Sto10g2316 843 Pfam ATPase family associated with various cellular activities (AAA) 555 685 IPR003959 GO:0005524|GO:0016887
Sto10g2316 843 Gene3D - 687 776 - -
Sto10g2316 843 Coils Coil 752 786 - -
Sto10g2316 843 MobiDBLite consensus disorder prediction 433 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2316 Sto-Chr10 33355013 33362196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2316 515 777 Calmodulin-binding Proteins AT3G56690 36.330 1.58e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2316 - - gmx:100804099 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2316 10 33355013 33362196 Sto10g2316 10 33355013 33362196 ECH