Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2255 ATGGATGAGTTTTGGATTAAGTTTTGTGGGCAATCTTCTTCTTGTTCATCAAGTactggtgatgatgatgatggtggaaAGTCTTGCAGTTATTACAATCTCAATCTCTTGGGAGATCCATCCTCATGTATCAACCACTTGTTCATCATTTCCCTTGATGTGTTGCTTCTCTTCATCCTCTCCTTCATTATGATCCACAAGTCACCACTGATGAAGCAGTCATTTCATCATCAGTCACCAAGGCATTCAACTTTGCAGGTACTCTCTGCTGTGGTGAACTCCTGTCTTGGGGTTGTTCATCTCTTcattgggatttgggttttggaggAGAAGTTGAGGATAAGCCAAACCATCTTGCCTCTCAATTGGTGGTTGCTAGAATTCTTCCAAGGCTTCACATGGTTGTTTGTGGGATTAGCAGCATCTCTTCATTTGAAACAACTTCCAAGAACATGGCTATGGCTGTTCTCTGTTCTTGTCTTCATAGTTTCTGGTGTTTCCTGTGCTTCATCCTTGTTTTATGCAGTTCAGGACACAGAACTCTTCCTTAAGGTAGCTTTGGATGTTGTGTCTTTTCTGGGGGCAATTTTATTGCTCTTGTGCACATATAAGGAATATAGTTCTAATAAGCATGAAGAGATCACACATGAAAGCCTTTATACCcctttgaataataataataataataataataataataataataacaatgttGATTCTATTGTAACCCCATTTTCCAAAACTGGATTCCTCAGTAAGATTTCATTCTGGTGGTTGAATCCATTGTTGAAAAAGGGCAAAGAGAAGACACTTCAGGATGGAGATATCCCAAAGTTGCCAGAAGCAAATCAAGCAGAAAATTGCTACTTGGAGTTTTTGGACCATTTAGAGAATCAGAAACAGAAAGAGCCAACATTACAGCCATCAATTCTGAAGTTAATAGTTTTGTGCAATTGGAGAGAGATTCTGATTTCTGGGTTCTTTGCTTTGTTAAAAGTGATCACTCTTTCTCTTGGTCCTCTCCTTCTGAATGCTTTTATTTTGGTTGCTGAAGGTAAAGAGAGTTTCAAATATGAAGGTTATGCATTGACCATAGTGATTTTGTTTGTGAAGATCATTGAATCTGTGTCACAAAGGCAATGGTTTTTTCGGACTCGAGTCATCGGTATTAGAGTCCGGTCTTTGCTTACCGCGGCCATATATAAGAAGCAATTGAGGCTATCCAATGCTTCTAGGTTGAAGCATTCTAGTGGGGAGATTATGAACTATGTGACAGTTGATGCCTATAGAATTGGAGAATTCCCCTTTTGGTTTCACCAAACTTGGTCCACAAGTGTCCAAGTATGCATTGCTTTAACTGTTCTTTCTCAGGCTGTTGGATTGGCCACAATTGCTTCCTTGGTGGTGATAGTTCTCACTGTGCTTTGCAATTCTCCACTTGCCAAGTTGCAGAACAAGTTCCAAAGCAAGCTCATGGTGGCACAGGACGAGAGGCTCAAGGCGACATCCGAGGCTCTCGCGAACATGAAAGTGTTGAAGCTATATGCTTGGGAGAATCACTTCAAGAAAGCCATAGAGAGGCTAAGGATGGAGGAGCTCAAGTGGTTACTTGCAGTACAATTAAGAAAGGGATATAACACTTTGTTCTTCTGGTCCTCACCTGTCTTGGTCTGTGCTGGTTCCTTTGTGGCTTGTTACTTCCTTAAGGTGCCTTTGCATGCAAATAATGTCTTCACCTTCTTGGCGACGGTTCGGCTTCTTCAAGATCCAATTAGGACTATTCCTGATGTTATTGGGGTGGTCATTCAAGCAAAAGTGGCATTTGAGAGGATTGTTAGATTTCTTGAGGCTCCTGAGTTGCAGGGTGAAAATTTTCACATCAAGAGATGCTTTAATAATGATAGATTACATGGCTCGGTCTCGATTAAGTCCGCGAACTTTTCTTGGGAAGATAGAACTTTGAAATCAACGCTCCGAAACATCGATTTAGAGGTTAAACCGGGGCAGAAGGTTGCCATTTGTGGAGAAGTTGGCTCAGGAAAATCAACCCTCTTATCAGCAATTCTTGGAGAAGTGCCTCATACTCAAGGAAGTATTAAAGTTCATGGGAAGTTTGCCTATGTTTCTCAAACTGCATGGATACAAGCAAGCACGGTAAGGGAGAATATATTATTTGGATCAGCCATGGATGCTCAAAGATATCAAGAAACACTACACAATTCTTCACTTGTGAAGGACCTTGAAATGTTTCCCCATGGTGATCTCACTGAAATAGGGGAGAGAGGAGTTAACTTGAGCGGAGGTCAGAAGCAGAGAATCCAACTCGCTCGCGCTCTTTATCAGAACGCCGATATATATCTTCTCGATGATCCATTTAGCGCTGTGGATGCACATACCGCCACAAATTTGTTCAATGAGTATGTGATGAAAGGACTTGCAGGGAAGACAGTGTTACTTGTGACTCATCAAGTTGATTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGAGAAATCTTGCAATCTGCCCCTTATCATCATTTATTGACCTCAAGCCAGGAATTTCAAGACCTAGTGAATGCTCATAAGGAAACTGCTGGTTCCTCTAATAGCCTTGTGGATTCTACTTCTTCCAAAAGATATTCAGATTCCGTTAGAGAAATCACAAACAGCAATAATAATGCAGAGAAGGATCAATTCCAAGAATCagaaggtggtggtggtgatcaATTGATTAAGCAAGAAGAGAGGGAAAGAGGGGACATAGGGTTCAAGCCATACTTGCAGTATCTGAATCAGAACAAGGGCTATATATACTTCTTCATGACTGccatctttcatcttttatttgcaATTTGCCAGATACTTCAGAACTCATGGATGGCTGCACATGTAGATGACCCCCATGTTAGTACATTGCGGTTGATCATAGTGTACCTGTTGATTGGAGTTGTTTCAACAGTATTCTTGCTCATCAGGAGTATGTCTCCGGTTGCTCTGTGTCTTCAATCGTCGAAATCTCTGTTTTCGCAGCTTCTGAACTCCCTTTTTCGCGCACCGATTTCGTTTTATGACTCCACGCCTCTGGGAAGGATACTTAGCAGgGTTTCATCAGATCTCAGCATTGTTGATTTGGATGTACCAATGTTCCTtacttttgctgttggagcTACTATAAATTGCTATTCTATTCTTGCAGTTTTATCAGTCATTGCCTGGCAAGTCTTGTTTGTCTCAATTCCAATCGTCTATATTGCAATTCAGTTGCagAGATACTACTTGGCCTCTGCAAAAGAATTGATGAGGATGAATGGAACAACAAAATCATTTGTAGCCAATCATCTAGCTGAATCAGTTGCTGGAGCAGTAACAATAAGGGCATTCAGAGAGGAAGATCGTTTCTTCGCCAAGAATCTTGATCTGATTGATGTAAATGCGAGCCCTTTGTTCTATAATTATGCAGCAAATGAGTGGCTCATCCAAAGGTTGGAGACACTTGGTGCACTTGTTCTTACTGCTACTGCACTTTGCACAGTCATGCTTCCACATGGGACTTTCACATCTGGATTTGTTGGAATGGCTCTGTCCTATGGCCTTTCATTAAATGCATCCTTTGTATATTCTATTCAACACCAATGCACTATATCCAATTACATAATATCAGTGGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCTCCAGAAGTCATTGAAGGGAATCGTCCTCCTTCTAATTGGCCACTTGCAGGAAAAGTAGAAATAAAAGATTTGCAGATAAAATACAGGGCTAATGCACCACTTGTACTGCGTGGGATCACATGCACAATTGAAGGAGGGCACAAGATTGGGATTGTGGGTCGTACAGGGAGTGGTAAGTCCACTCTGATAGGTGCTTTGTTTCGTCTTGTGGAGGCAGCAGGTGGGAAGATCATAGTGGATGCCATAGACATTTCTTCTATTGGGCTTCATGATTTGAGGTCTCGTTTTGGGATTATACCTCAGGATCCTACTCTTTTCAATGGAACCGTTAGATACAATTTGGACCCCTTGTCACAACATTCTGATCAGCAGATATGGGAGGTTCTTAGCAAGTGTCAACTACTAGAGGCAGtccaagagaaagaaaagggcTTAGACTCCTCAGTTGTGGAAGATGGATCAAACTGGAGCATGGGACAACGGCAATTATTCTGCTTAGGGCGCGCGCTTTTGAGGCGAAGTCGAATATTGGTGCTCGACGAAGCGACTGCATCGATTGACAATGCAACTGATTTGATTCTTCAAAAAACCATCAGGTCTGAGTTTGCAGATTGTACTGTCATCACTGTGGCTCATAGGATACCTACTGTCATGGATTGTGATAAGATTCTTGCCCTCAGTGATGGAAAATTAGTGGAATATGATGAGCCAAAGAAGTTAATGAAGGATGAGGGGTCACTATTTGGACAGCTTGTTAAGGAATATTGGTCTCATTTTCAATCTGCAGAATCACATTGA 4509 0.3996 MDEFWIKFCGQSSSCSSSTGDDDDGGKSCSYYNLNLLGDPSSCINHLFIISLDVLLLFILSFIMIHKSPLMKQSFHHQSPRHSTLQVLSAVVNSCLGVVHLFIGIWVLEEKLRISQTILPLNWWLLEFFQGFTWLFVGLAASLHLKQLPRTWLWLFSVLVFIVSGVSCASSLFYAVQDTELFLKVALDVVSFLGAILLLLCTYKEYSSNKHEEITHESLYTPLNNNNNNNNNNNNNNVDSIVTPFSKTGFLSKISFWWLNPLLKKGKEKTLQDGDIPKLPEANQAENCYLEFLDHLENQKQKEPTLQPSILKLIVLCNWREILISGFFALLKVITLSLGPLLLNAFILVAEGKESFKYEGYALTIVILFVKIIESVSQRQWFFRTRVIGIRVRSLLTAAIYKKQLRLSNASRLKHSSGEIMNYVTVDAYRIGEFPFWFHQTWSTSVQVCIALTVLSQAVGLATIASLVVIVLTVLCNSPLAKLQNKFQSKLMVAQDERLKATSEALANMKVLKLYAWENHFKKAIERLRMEELKWLLAVQLRKGYNTLFFWSSPVLVCAGSFVACYFLKVPLHANNVFTFLATVRLLQDPIRTIPDVIGVVIQAKVAFERIVRFLEAPELQGENFHIKRCFNNDRLHGSVSIKSANFSWEDRTLKSTLRNIDLEVKPGQKVAICGEVGSGKSTLLSAILGEVPHTQGSIKVHGKFAYVSQTAWIQASTVRENILFGSAMDAQRYQETLHNSSLVKDLEMFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMKGLAGKTVLLVTHQVDFLPAFDSVLLMSDGEILQSAPYHHLLTSSQEFQDLVNAHKETAGSSNSLVDSTSSKRYSDSVREITNSNNNAEKDQFQESEGGGGDQLIKQEERERGDIGFKPYLQYLNQNKGYIYFFMTAIFHLLFAICQILQNSWMAAHVDDPHVSTLRLIIVYLLIGVVSTVFLLIRSMSPVALCLQSSKSLFSQLLNSLFRAPISFYDSTPLGRILSRVSSDLSIVDLDVPMFLTFAVGATINCYSILAVLSVIAWQVLFVSIPIVYIAIQLQRYYLASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFREEDRFFAKNLDLIDVNASPLFYNYAANEWLIQRLETLGALVLTATALCTVMLPHGTFTSGFVGMALSYGLSLNASFVYSIQHQCTISNYIISVERLNQYMHIQSEAPEVIEGNRPPSNWPLAGKVEIKDLQIKYRANAPLVLRGITCTIEGGHKIGIVGRTGSGKSTLIGALFRLVEAAGGKIIVDAIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQQIWEVLSKCQLLEAVQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCDKILALSDGKLVEYDEPKKLMKDEGSLFGQLVKEYWSHFQSAESH 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2255 1502 Gene3D ABC transporter type 1, transmembrane domain 909 1237 IPR036640 GO:0005524|GO:0016021
Sto10g2255 1502 Gene3D ABC transporter type 1, transmembrane domain 295 619 IPR036640 GO:0005524|GO:0016021
Sto10g2255 1502 Pfam ABC transporter 658 792 IPR003439 GO:0005524
Sto10g2255 1502 Pfam ABC transporter 1273 1421 IPR003439 GO:0005524
Sto10g2255 1502 SUPERFAMILY ABC transporter transmembrane region 309 616 IPR036640 GO:0005524|GO:0016021
Sto10g2255 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1256 1490 IPR003439 GO:0005524
Sto10g2255 1502 SUPERFAMILY ABC transporter transmembrane region 929 1239 IPR036640 GO:0005524|GO:0016021
Sto10g2255 1502 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Sto10g2255 1502 MobiDBLite consensus disorder prediction 868 887 - -
Sto10g2255 1502 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524
Sto10g2255 1502 Pfam ABC transporter transmembrane region 322 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2255 1502 Pfam ABC transporter transmembrane region 941 1199 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2255 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1246 1483 IPR027417 -
Sto10g2255 1502 CDD ABCC_MRP_domain2 1254 1474 - -
Sto10g2255 1502 CDD ABCC_MRP_domain1 640 840 - -
Sto10g2255 1502 SMART AAA_5 667 840 IPR003593 -
Sto10g2255 1502 SMART AAA_5 1282 1466 IPR003593 -
Sto10g2255 1502 CDD ABC_6TM_ABCC_D2 942 1231 IPR044726 GO:0140359
Sto10g2255 1502 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 78 1502 - -
Sto10g2255 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 642 863 IPR003439 GO:0005524
Sto10g2255 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 863 IPR027417 -
Sto10g2255 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2255 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1219 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2255 1502 Gene3D - 620 887 IPR027417 -
Sto10g2255 1502 Gene3D - 1240 1491 IPR027417 -
Sto10g2255 1502 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 78 1502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2255 Sto-Chr10 32635327 32647880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2255 634 855 Calmodulin-binding Proteins AT2G36910 31.381 1.20e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2255 K05666 - gmx:100811468 2205.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2255 10 32635327 32647880 Sto10g2255 10 32635327 32647880 ECH