Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2251 ATGGATGATTTTTGGAGCAAGTTTTGTGGGGAATCTTCTTGTTCATCTCTTGAGGGAAAGTCTTGTAGTTATTATGATCTTAAGCTTTTGGGAGATCCTTCCTCATGTATCAATCATTTATTCATCATTTGCCTTGATTTATTGCTTCTGTTCATTCTTCTCTCATTCATGATTATGATCCAAAAGAAGCCATTTCAAGTACaaagatattattattattcaactTTGCAAGTAGCTTCTGCTATAGTGAACTCCTGTCTTGGGGTTGTGCATCTGTGCTTTGGGATTTGGATTTTAGAGGAGAATTTGAGGGTAAGCCACACTATGTTGCCTCTTAATTGGTGGTTACTAGAGCTCTTTCATGGGTTTTCATGGCTAACAGTGGGATTAACACTAAGCCTTCGTTCGAAGCGGCTTCCTCGAACACGGTCTCGGCTATTCGCGGTTCTTGTCTTTATAATTTCTGGTGTTTTCTGTGCTCTATCCATCATGTTTTATTCCTTTAGTGACACAAAATTCTCCCTTAAGGTTGCTTTAGATGCTCTATCTTTTCTAGGAGCAATTTTATTGCTCTTGTACACATTTAAGGAGGAACATTATTATAAGCATGAAGAAAGTCATGATGAAGGCCTTTACATTTATACCCCTTTGAATAATAATGTTGATTCCATTAGCTATGAAAACCCATTTTCCAAAGCTGGATTCTTCAATAGGATCTCATTTTGGTGGTTGAATCCACTGATGAAAAGAGGTAAAGAGAAAACACTTCAAGATGAAGATATCCCCAAGTTGCCAGAAGAagatcaagcacaaagttgctATTTGGAGTTTCTAGACCAATTGAACAAacagaaacaaaaacaaaaagaagccACTCACTCTCTTCAGCCATTGATTTTGAAGACAATAATTTTGTGCCATTGGAGAGAGATTCTGATTTCTGGGTTCTATGCATTGATGAAGATACTCACTCTCTCTTCTGGTCCACTTCTTCTAAATTCCTTCATATTGGTTGCTGAAGGTAAAGAAAGTTTCAAACATGAAGCATATGTATTGACCATACTACTCTTCTGTATAAAGATCATAGAATCCTTCTCTGAAAGGCAATGGTTTTTCTGGACTCGGGTCATCGGCCTTCGTGTCCGGTCTTTGCTCACGGCCGCCATATATAAGAAGCAACTCAGGCTATCCAGTGCTTCTAAGTTGATGCATTCTGGTGGGGAGATTATGAACTATGTGACAGTAGATGCCTATAGAGTTGGAGAATTCCCATATTGGTTTCACCAAATTTGGACCACAATTGTCCAACTATGTATAGCAATAGTGATTATTTTCCAAGCTATTAAACTAGCCACAATTGCCTCCTTGGTAGTGATTCTTCTCACAGTGCTTCTGAACACTCCACTTGCAAAATTACAAAACAAGTTTCTGAGCCAACTCATGGTGGCACAAGATGAGAGGCTCAAGGCCATTTCTGAGGCTCTAGGGAACATGAAAGTGTTGAAGTTATATGCTTGGGAGAATCACTTCAAGAAAGGTATAGAGAAGTTAAGAAAAGTTGAGCTCAATTATTTACTTGCAGCACAAGCAAGTAAGGCTTATAACATTGTTCTGTTTTGGTGTTCACCTGTTTTGGTCTCTACTGCTTCATTTGTGGCTTGTTACTTCCTTAATGTGCCTTTACATGCAAATAATGTGTTCACTTATGTAGCCATTTTGAGGATTCTTCAAGAGCCTATTAGAGTAATTCCTGATGTTATTGGGGTGATGATTCAGGCAAAAGTGTCATTTGAGAGGATTGTTAGGTTCCTTGAGGCTGAGGAGTTGGAGACTGGTGGTGGTGGAagtgaaaagaagaagagattgTTGTTCAATAATGATAGTAGTAGTGTTCATGGGTCAGTTTTGATCAAGAATGGTGAATTTTCTTGGGATGGTAACACATCAAAGGAAACACTTAGAAACATAGATTTAGAGGTGAAATGTGGGGAAAAAGTGGCCATTTGTGGAGAAGTTGGCTCTGGGAAATCAACCCTCTTAGCTGCAATTCTTGGAGAAGTTCCTCCTACTCAAGGAacaATTAAAGTTCATGGGAAATTTGCCTATGTTTCTCAAACAGCATGGATACAAACAGGTACAATAAGGGACAATATATTGTTTGGATCAGCCATGGATGCTCAAAGATATCAAGAAACAATTCAAAGTTCTTCATTAGTGAAGGACCTTGAAATGCTTCCCCATGGTGATCTCACTGAAATAGGGGAGAGAGGAGTTAACTTGAGTGGAGGTCAAAAGCAGAGAATTCAACTTGCTCGTTCTCTTTATCAGAATGCTGATATATATCTTCTTGATGATCCATTTAGTGCTGTGGATGCACATACAGCCACCAATTTGTTCAATGAGTATGTTATGAAAGGTCTTTCTGGGAAGACAGTCTTACTTGTGACTCATCAAGTTGACTTCCTTCCGGCATTTGATTCTATCTTGTTAATGTCAGATGGAGAAATCCTACAATCTGCACCTTATCATCAATTATTGACCTCAAGCCAAGAATTTCAAGATCTTGTTAATGCTCATAAGGAAACTGCTGGTTCTGATAGTCTTGTGGATCCTGCTTCTTTCAAAAGACATGCAGATTCCGATAGAGAAATTAGAAAAGCCAATAATGTTGTAACTGATGATGATCCATTTAAAGAAACAACAAAAAGTGATCAGTTAATTAAGCAAGAAGAGAGGGAAAGAGGAGACAATGGGTTCAAACCATACTTGCTGTATCTAAATCAGAACAAAGGCTATATATACTTTTGTGTTGCTGCTCTTTCTCACCTCACATTTGTGATATGTCAGATACTTCAAAACTCATGGATGGCTTTAAATGTAGACAACTCCCATGTGTCATCAGATCTCAGCATTGTTGATTTGGATATACCATGGATCCTTATTTTAGGTGTTGGAACTACTACAGTTTGTTATGGCAATCTTACAGTTTTAGCAGTTATTACCTGGCTAGTCTTGTTTGTCTTAATTCCAATGGTTTGCATTACTATTCACTTACagAGATACTACTTAGCTTCTGCAAAAGAATTGATGAGGATGAATGGAACAACAAAATCATTTGTAGCTAACCATCTAGCTGAATCAATTGCTGGAGCTGTGACAATAAGGGCATTTGAAGAGGAAGATCGTTTCTTTGCCAAGAATCTTCAAGTAATTGATGTAAATGCAAGTCCTCTATTCCATAGTTTTGCAGCAAATGAGTGGCTCATTCAAAGATTAGAAACACTCTGTGCTCTTCTTCTTACCTCCACTGCATTCTGCATGGCCATCCTTCCACCTGGGACTTTCTCCTCTGGAATTGTTGGCATGGCTTTATCTTATGGCCTTTCATTAAATGCAGCTTTTGTATTTTCTATTCAACAACAATGCACTATATCTAATTCTATAATATCAGTGGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCTCCAGAAGTCATAGAAGGAAATCGTCCTCCTGTGAATTGGCCAGATGCAGGAAAAGTAGAACTAAAGGATTTGCAGATAAAATATAGGGCTAATGCACCACTTGTACTGCGTGGGATCACATGCACAATTGAAGGAGGGCATAAGATTGGCATTGTGGGTCGTACAGGGAGTGGGAGGTCCACTCTGATAGGTGCTTTGTTTCGTCTTGTGGAGGCAGCTGGTGGGAAGATCATAGTGGATGCCATAGACATTTCTTCTATTGGGCTTCATGATTTGAGGTCTCGTTTTGGCATTATACCTCAGGATCCTACTCTTTTTAATGGAACGGTTAGATATAATCTAGACCCCTTGTCTCAACATTCTGATCAAGAAATATGGGAGGTTCTTGGGAGGTATCAATTGCTAGAGGCAAtccaagagaaagaaaagggcTTAGACTCCTCAGTTGTGGAAGATGGATCAAATTGGAGCATGGGGCAGCGACAATTATTCTGCTTAGGACGTGCTCTTCTGAGAAGAAGTCGAATATTGGTGCTCGACGAAGCTACTGCGTCAATTGATAATGCAACTGACTTGATTCTTCAGAAAACAATTAAGTCTGAGTTTGAGAATTGCACTGTCATCACTGTGGCTCATAGGATTCCAACTGTGATGGATTGTGATATGATTCTTGCCCTCAGTGATGGAAAATTGGTGGAGTATGATGAGCCAATGAAGTTGATGAAGGAAGAAGGATCACTGTTTGGGCAGCTTGTCAAGGAATATTGGTCGCATTTTCATTCTGCAGAATCTCATTGa 4290 0.3821 MDDFWSKFCGESSCSSLEGKSCSYYDLKLLGDPSSCINHLFIICLDLLLLFILLSFMIMIQKKPFQVQRYYYYSTLQVASAIVNSCLGVVHLCFGIWILEENLRVSHTMLPLNWWLLELFHGFSWLTVGLTLSLRSKRLPRTRSRLFAVLVFIISGVFCALSIMFYSFSDTKFSLKVALDALSFLGAILLLLYTFKEEHYYKHEESHDEGLYIYTPLNNNVDSISYENPFSKAGFFNRISFWWLNPLMKRGKEKTLQDEDIPKLPEEDQAQSCYLEFLDQLNKQKQKQKEATHSLQPLILKTIILCHWREILISGFYALMKILTLSSGPLLLNSFILVAEGKESFKHEAYVLTILLFCIKIIESFSERQWFFWTRVIGLRVRSLLTAAIYKKQLRLSSASKLMHSGGEIMNYVTVDAYRVGEFPYWFHQIWTTIVQLCIAIVIIFQAIKLATIASLVVILLTVLLNTPLAKLQNKFLSQLMVAQDERLKAISEALGNMKVLKLYAWENHFKKGIEKLRKVELNYLLAAQASKAYNIVLFWCSPVLVSTASFVACYFLNVPLHANNVFTYVAILRILQEPIRVIPDVIGVMIQAKVSFERIVRFLEAEELETGGGGSEKKKRLLFNNDSSSVHGSVLIKNGEFSWDGNTSKETLRNIDLEVKCGEKVAICGEVGSGKSTLLAAILGEVPPTQGTIKVHGKFAYVSQTAWIQTGTIRDNILFGSAMDAQRYQETIQSSSLVKDLEMLPHGDLTEIGERGVNLSGGQKQRIQLARSLYQNADIYLLDDPFSAVDAHTATNLFNEYVMKGLSGKTVLLVTHQVDFLPAFDSILLMSDGEILQSAPYHQLLTSSQEFQDLVNAHKETAGSDSLVDPASFKRHADSDREIRKANNVVTDDDPFKETTKSDQLIKQEERERGDNGFKPYLLYLNQNKGYIYFCVAALSHLTFVICQILQNSWMALNVDNSHVSSDLSIVDLDIPWILILGVGTTTVCYGNLTVLAVITWLVLFVLIPMVCITIHLQRYYLASAKELMRMNGTTKSFVANHLAESIAGAVTIRAFEEEDRFFAKNLQVIDVNASPLFHSFAANEWLIQRLETLCALLLTSTAFCMAILPPGTFSSGIVGMALSYGLSLNAAFVFSIQQQCTISNSIISVERLNQYMHIPSEAPEVIEGNRPPVNWPDAGKVELKDLQIKYRANAPLVLRGITCTIEGGHKIGIVGRTGSGRSTLIGALFRLVEAAGGKIIVDAIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGRYQLLEAIQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIKSEFENCTVITVAHRIPTVMDCDMILALSDGKLVEYDEPMKLMKEEGSLFGQLVKEYWSHFHSAESH 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2251 1429 CDD ABCC_MRP_domain2 1181 1401 - -
Sto10g2251 1429 CDD ABC_6TM_ABCC_D1 313 600 IPR044746 GO:0140359
Sto10g2251 1429 Gene3D ABC transporter type 1, transmembrane domain 961 1164 IPR036640 GO:0005524|GO:0016021
Sto10g2251 1429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1183 1417 IPR003439 GO:0005524
Sto10g2251 1429 Gene3D - 1167 1418 IPR027417 -
Sto10g2251 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1173 1410 IPR027417 -
Sto10g2251 1429 CDD ABCC_MRP_domain1 635 835 - -
Sto10g2251 1429 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 592 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2251 1429 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 963 1146 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2251 1429 SUPERFAMILY ABC transporter transmembrane region 300 600 IPR036640 GO:0005524|GO:0016021
Sto10g2251 1429 SMART AAA_5 662 835 IPR003593 -
Sto10g2251 1429 SMART AAA_5 1209 1401 IPR003593 -
Sto10g2251 1429 Pfam ABC transporter 1200 1348 IPR003439 GO:0005524
Sto10g2251 1429 Pfam ABC transporter 653 787 IPR003439 GO:0005524
Sto10g2251 1429 Gene3D - 613 872 IPR027417 -
Sto10g2251 1429 SUPERFAMILY ABC transporter transmembrane region 963 1163 IPR036640 GO:0005524|GO:0016021
Sto10g2251 1429 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 963 1429 - -
Sto10g2251 1429 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 966 - -
Sto10g2251 1429 CDD ABC_6TM_ABCC_D2 966 1158 IPR044726 GO:0140359
Sto10g2251 1429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 858 IPR003439 GO:0005524
Sto10g2251 1429 ProSitePatterns ABC transporters family signature. 760 774 IPR017871 GO:0005524
Sto10g2251 1429 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 963 1429 - -
Sto10g2251 1429 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 966 - -
Sto10g2251 1429 Pfam ABC transporter transmembrane region 963 1126 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2251 1429 Pfam ABC transporter transmembrane region 312 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g2251 1429 Gene3D ABC transporter type 1, transmembrane domain 300 609 IPR036640 GO:0005524|GO:0016021
Sto10g2251 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 858 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2251 Sto-Chr10 32583747 32594368 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2251 630 880 Calmodulin-binding Proteins AT2G36910 29.670 2.06e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2251 K05666 - pop:18105665 1806.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2251 10 32583747 32594368 Sto10g2251 10 32583747 32594368 ECH