Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2230 ATGTGGACAACTCCTTCTGTAGCGCCAATAACAGACCTGGGATTGGTGTCATCGTTCGGGATGAGAACGGTTTGGTACTTAATGGTTGTGTTCCATGTGTTAGCTAATTCTTCTTTTGAAGCTAAGGTCATCACTATCAAGAAGGCATGTGAGATGATTTCGGATTTGGATCTGGGCGATCCATTTATAGGAAGTAGCTATACTCACAATTCATCTTCATTTGAAATTAATGTTCTTGATTGGTTCGCTAGCTTATGGGAAATTGAGAAGAATGAGTATTGGGGATACATAACCACTGGTGGAACTGAAGATTGTGCTCATCTCAAGATTTCTCTTCTTGCCCACAAGGACAAACCAGCCATCATCAACCTAAACATAGGGACCACTATGAAAGGTGCTATTGATGACCTTGATCTTGTGCTGAAGACACTTGAAGAAGTCGGCTTCACCCGTGATCGATTCTATATCCATTGTGATGGAGCTCTACTTGGAATTATGATTCCTTTTATTAAACAAGCACCAAATATCAATTTCAAAAAACCCATTGGAAGCATAGCTATTTCTGGGCATAAGTTCTTGGGATGCCCCATTCCTTGTGGAGTAGTAATCACTCGTTCAGAATACATCGATGTTCTCTCTAAAAACATTGAATACATTGCTTCAAAGGATATCACAATCACAGGAAGCCGTTGTGGGCATGCTCCAATCTTCCTTTGGTACGCTCTAAAGAAGAAAGGCTTGATAGGGCTCAAGAAAGAAGTGGAGAAATGCATAACAAATGCTGATTATTTGTATGATGAACTACGTAATGCTGGAATTGGTGCCATGAAGAATGAGTTTAGCAACATTGTAGTGTTTGAGAAGCCTTTAGATGACAAGTTTTCTCGTAAGTGGAGTTTGGCTTTAAATGAAAACATAGCACATGTGGTGGTGATGCAGCATGTGACTATTGAGATATTGGACTCATTTGTCAGTGAATTTGTCCAAAACCAATCCATTTGGTGCCAAGATGGGAAAAATCAGCCTCCATGCATTCAAGACCAAATGGGGGTTGCTAATTGTGCTTGTAAATTACATAAGCCATTATAA 1089 0.3985 MWTTPSVAPITDLGLVSSFGMRTVWYLMVVFHVLANSSFEAKVITIKKACEMISDLDLGDPFIGSSYTHNSSSFEINVLDWFASLWEIEKNEYWGYITTGGTEDCAHLKISLLAHKDKPAIINLNIGTTMKGAIDDLDLVLKTLEEVGFTRDRFYIHCDGALLGIMIPFIKQAPNINFKKPIGSIAISGHKFLGCPIPCGVVITRSEYIDVLSKNIEYIASKDITITGSRCGHAPIFLWYALKKKGLIGLKKEVEKCITNADYLYDELRNAGIGAMKNEFSNIVVFEKPLDDKFSRKWSLALNENIAHVVVMQHVTIEILDSFVSEFVQNQSIWCQDGKNQPPCIQDQMGVANCACKLHKPL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2230 362 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 184 205 IPR021115 GO:0016831
Sto10g2230 362 Gene3D Aspartate Aminotransferase, domain 1 243 331 IPR015422 GO:0003824
Sto10g2230 362 Pfam Pyridoxal-dependent decarboxylase conserved domain 111 272 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto10g2230 362 PANTHER - 104 360 - -
Sto10g2230 362 PANTHER - 58 103 - -
Sto10g2230 362 Gene3D - 104 242 IPR015421 GO:0003824
Sto10g2230 362 SUPERFAMILY PLP-dependent transferases 49 328 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2230 Sto-Chr10 32314814 32317533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2230 126 284 Calmodulin-binding Proteins AT5G17330 28.571 8.32e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2230 K25193 - gmx:100781665 442.58