Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2220 ATGAGCGATCCTTGCTTAATGGAAATAGAGAGCCTATCAACTGCCGCAAATTTGCTTCCTCCGGTGGTGCCTCTCACCAAAATTGAGAGCCCACAAAATGTGAGTACGAGCCTCGCCATTTCCAACTTAAATGGGGATACAAAAGAGAATTTGGCTCATCTTATCAATAACTATGTGCAATCTCTATCTCACACCAAAATGCACATTCTAGGTTTCCCAGTGAATCTAGACTTCGATTATGAGGCATTGGGACAGTTGCTACATTTTCATATAAACAATGCGGGTGATCCATTTATGGGAAATTGCTTCGCTCTCAATTCAACTTCTTTTGAACTTTGTGTTCTTGATTGGTTTGCTAGTTTGTGGGGAATTCAGAAGAATGAGTATTGGGGATATGTCACTAATGGTGGAACAGAAGGAAATCTTTATGGGATCTTAGTAGGgaGAGAGCAATTTCCAGAAGGAATTCTATACACATCAAATGAATCACATTATTCAGTATTCAAAATAGCAAGAATGTATAGAATGCAATGTGTGAAGGTTGCTACTTCGAGCTCTGGCGAGATTGATTGTGCTCATCTTAAGGCTTCACTTCTAGCTCACAAGGACAAGCCAGCCATCATCAACCTAAACATAGGGACAACTATGAAAGGAGCTATCGATGACGTTGATCTTGTGATACAAACACTCGAAGCATGCGGTTTCACTCCTGATCGATTCTACATACATTGTGATGGAGCTCTTTTTGGAATGATGCTTCCTTTTATTGAACACGCACCAAGGATTAGTTTCAAGAAGCCAATAGGAAGCATAGCTATTTCTGGCCATAAGTTCTTGGGGTGCCCTATCCCTTGTGGGGTAGTAATAACTCGCTCAAAACACACGAATTCCTTCTCTAGAGACATCGAAATCATAGCTTCGAGGGATGCCACGATCACCGGAAGCCGTAACGGGCACGCTCCGATCTTCCTCTGGTACGCTCTGAAGAAGAAAGGCTTGACAGGGGTCAAGAAAGAAGTGGAGAGATGCATCGCGAATGCTAATTACCTATATGATCAACTTcgtgatgctggaattggagtcgttAAGAATGAGTATAGCAACATTGTAGTGTTCGAGAAGCCTCTAGATGATGGGTTCGCTCGTAGGTGGAGTTTGTCTTCAAGCGGGAACATAGCACATGTGGTGGTGATGCAGCACGTGACCATTGAGATGTTGGACTTGTTTGTGAGTGAGTTCGCTCAaaaacgatttctttggatgcATTATGGACAAAAAGAAGTAGGTGTTTTTAAATTGTGTGAACTTGGATAA 1314 0.4072 MSDPCLMEIESLSTAANLLPPVVPLTKIESPQNVSTSLAISNLNGDTKENLAHLINNYVQSLSHTKMHILGFPVNLDFDYEALGQLLHFHINNAGDPFMGNCFALNSTSFELCVLDWFASLWGIQKNEYWGYVTNGGTEGNLYGILVGREQFPEGILYTSNESHYSVFKIARMYRMQCVKVATSSSGEIDCAHLKASLLAHKDKPAIINLNIGTTMKGAIDDVDLVIQTLEACGFTPDRFYIHCDGALFGMMLPFIEHAPRISFKKPIGSIAISGHKFLGCPIPCGVVITRSKHTNSFSRDIEIIASRDATITGSRNGHAPIFLWYALKKKGLTGVKKEVERCIANANYLYDQLRDAGIGVVKNEYSNIVVFEKPLDDGFARRWSLSSSGNIAHVVVMQHVTIEMLDLFVSEFAQKRFLWMHYGQKEVGVFKLCELG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2220 437 Gene3D Aspartate Aminotransferase, domain 1 329 417 IPR015422 GO:0003824
Sto10g2220 437 SUPERFAMILY PLP-dependent transferases 71 414 IPR015424 -
Sto10g2220 437 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
Sto10g2220 437 PANTHER - 39 427 - -
Sto10g2220 437 Gene3D - 87 328 IPR015421 GO:0003824
Sto10g2220 437 Pfam Pyridoxal-dependent decarboxylase conserved domain 48 358 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2220 Sto-Chr10 32193271 32198173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2220 212 370 Calmodulin-binding Proteins AT1G65960 29.885 4.92e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2220 K25193 - gmx:100781665 590.112