Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2214 atgcCAAAGTCGTCGGAGGAATCGAACGGCCGGAACTCGAGGCCGAGGCCGGCGGCGGGGTCTCCGTCTATCGGCCATCTCCGGAGCTTGTCCGTGGACTCCGATTTCTTCAACGGCCTCGGATTGAACGGCGCCCTCGATGGCGAGAAATTTGGCGGGAAAGGTGTGGAGGAGAGGAGAGCAgtcggtggtggtggtggtcatCACAGGCACAGTAATTCCATGGATGGGTCGTCGTCGATGTCGTTTGAGGCTGACTCTTCCATGGAGATCGATGGTGTGAAGAAGGCCATGGCCCCTGATAAGCTCGCTGAACTTGCTCTCGTTGATCCCAAGAGAGCTAGGAGGATTCTTGCCAATAGGCAATCTGCTGCTCGATCAAAGGAGAGAAAAATTCGTTATACAAATGAGCTGGAAAGGAAGGTACAGACACTTCAGACTGAAGCAACCAACCTCTCTGCCCAGGTTACTATTCTTCAGAGAGACACTACTGGGTTAACTGCTGAGAATAAGGAGCTTAAGCTGCGCTTAGAGGCTATGGAACAACAGGCCCAACTTAGAGATGCTCTCAATGATGCATTGAAGGATGAACTGCAACGCCTCAAGCTACAAACCAGCCGGATGGCGGCTATCAACGGCAACGCTTCATTCGGCGGGCTGCTCTCGCAATTTGCTTCCCAGTTGGCTTTGAGTCATTTGGTTAATAATCCTCAGTCGCAGCAAGCACAACAGCAGCCACAGCTCAGAATCCCTCCGCCCTCGGATCAGCCATTTAACGGGCAGCCAGGTGCCGACTTGATGGACTTCGGCCGGAAGAAGTAG 822 0.517 MPKSSEESNGRNSRPRPAAGSPSIGHLRSLSVDSDFFNGLGLNGALDGEKFGGKGVEERRAVGGGGGHHRHSNSMDGSSSMSFEADSSMEIDGVKKAMAPDKLAELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQTEATNLSAQVTILQRDTTGLTAENKELKLRLEAMEQQAQLRDALNDALKDELQRLKLQTSRMAAINGNASFGGLLSQFASQLALSHLVNNPQSQQAQQQPQLRIPPPSDQPFNGQPGADLMDFGRKK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2214 273 MobiDBLite consensus disorder prediction 46 83 - -
Sto10g2214 273 CDD bZIP_plant_RF2 113 162 IPR044759 GO:0003700|GO:0006355
Sto10g2214 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 110 173 IPR004827 GO:0003700|GO:0006355
Sto10g2214 273 Coils Coil 135 200 - -
Sto10g2214 273 MobiDBLite consensus disorder prediction 1 16 - -
Sto10g2214 273 Pfam bZIP transcription factor 112 164 IPR004827 GO:0003700|GO:0006355
Sto10g2214 273 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 254 - -
Sto10g2214 273 SUPERFAMILY Leucine zipper domain 112 164 IPR046347 GO:0003700|GO:0006355
Sto10g2214 273 MobiDBLite consensus disorder prediction 235 249 - -
Sto10g2214 273 Gene3D - 111 164 - -
Sto10g2214 273 SMART brlzneu 108 172 IPR004827 GO:0003700|GO:0006355
Sto10g2214 273 MobiDBLite consensus disorder prediction 235 273 - -
Sto10g2214 273 MobiDBLite consensus disorder prediction 51 65 - -
Sto10g2214 273 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 10 254 - -
Sto10g2214 273 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2214 Sto-Chr10 32141159 32146823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2214 26 255 bZIP Transcription Factor Family AT1G43700 54.852 4.04e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto10g2214 bZIP_1 3.4e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2214 K20557 - gmx:778142 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2214 10 32141159 32146823 Sto10g2214 10 32141159 32146823 ECH