Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2200 ATGGGTAGAAAGAAACCCGCCTCCCGCGAGGATGATAACCCACCCGCTGCATCTCAAGGCGGTGGAAAGTCGAAGAAGAAGGGGCTTGTGATCGATGATGATGAGTATTCTATTGGAACGGAGCTCTCGGAGGAGGTGCCACCCCAGGAAGAGAAGCCTGTGGTGACGGGGAAGAAGAAAGGTAAGAAAGGTAACCTAAAAGCTTCACAAGCTGAGGATGAAGACGTAGAAAATATCATgaatgatgacgatgatgaaCCTGAAGTTGTGTTTActgggaagaagaaggggaaatcCAAAAAAGGTGGTGGGAAGAGTGTGTTTACTGCTTCAGGCTTTGGTTTGCTTGGTGATGAGGAGGATGGAGAGAATGATGATGAGAACGACAAGTTCGGCTTAACTGGTGAGCCAGACGATGATGATAAGCCAGCGGTTAGTTTTTCCGGTAAGAAGAAGCCCTCAAAGGGTTCCAAAAAGGGTGGTGGTAGCTTGTTCACTGCGTCATCTTTTGATGCTATTGATGATGACAATGAAGATGAGGTGATTGATGATTCTGTGGAAAACAGAACAGAAGAAAATGATGACCTGGATGAACCGGTTCTTGCTTTTACAGGGAAGAAAAAATCATCTAAAAATAGCAAGAAGGGTGGTGCTACATTCACAGCATCTACTTTTGGTGATACTGATGGAGAGCAGGACAAAAATGAAAACgaaaaagaagatgaagatgaagatgttgCTCCAATCACTTTCTCAGGGAAGAAAAAGAAGTCATCCAAGTCTTCAAAGAAGGCTGTTAATTCATTTAGTGCGGCATTTGCTGATGAGTCTGCTATGGATGGTGAAGATAAGGTTGAGGATGAAGATATTTCTGTAGTTGCATTTTCTGGTAAAAAGAAGTCTtctaataagaaaaagaagactGCTACTGCCAAAGCTAGTGATGACTTTGAACTTGATAGTGAAAGCGTAGATGTTGCTGAACCTGAGCAACCTAGTGTAGCAGACAACAATAAAGCTAATAAGAGTGAAGAGGTGActgaaacttcaaaaaataagaagaagaagaataaaaagagtGGAAGAACTGCTCAAGAAGAAGAGGATTTGGACAAGCTCCTTGCTGAGCTTGGTGAGGCGCCTCCAGTAAAACCTGCTTCACAGCCACAGGATGATAAAGTTCAGGCTCCTTCTGAACTAGCTGCTCCTGCTGCTGCTGTGACAGGGGAAAAAGAAGGGGAAGACGAGACAGTAGAGTCAGCTGCTgctaaaaagaagaagaagaaaaaggaaaaggaaaaggagaagaagGCAGCAGccgcagcagcagcagcagctggGGGTGCACCAGAcaatgaaaagaaagaagatgttaaatctgagacaacggaAATAAAGAAGAATGAGTCCAAAACTAAAGCAGCTGACAAGAAAGTGCCAAAGCATGTCAGGGAAATGCAAGAGGCACTGGCTAGAAGAAAAGAGGCtgaagagaggaagaaaagggaagaagaggagaagctgaggaaggaagaggaggagcgACGCAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAGGCTAGACGTagaaaaaaggaaagggaaaaggaaaagcTTCAGAAAAAGAAGCAAGAAGGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCTCGTCGTTTGGAGGCAATGAGGAAGCAGTTTCTTGCTGGTACAGGGGCTGTCTCTCTCCCCACAGGAGACTCTGGCGCACCAGCTAAAAGGCCCATATATCAGACCAAGAAATCAAAACAAACCCATCATCAGAATGGTACTGCCCCTGTTAAGGCAGCTGAAGTTGTGGAAGCAATGGAAAATCAGGAAACCACCCCTGATGTTGATTCACTGGAACCGGAGAAGGTTGAAGTAACTGAATCAATCCAGGAGGAGGAAAAAGTGGAAACTTCTGAAGctgttgaagaagatgaagtggaagaagatgatgtggaGGATGAATGGGATGCAAAGAGCTGGGATGATGTTAATTTGAATGGCAAAAGTGCATTTGCTGATGAGGAGGCTGACTCTGAGCCAGAACCACTTGTGAAAAAGGATGTAAAGAATGCTGCGCCTCCAGCCGTTGCCAAGTCTACAGGCACAGTTAAGAAAGCTGTTTCTCAGGTTCCAGCTGAGCAAGTTGAGAGTAAAAAGCCGGTTGAAAATAAAAAGCAGGATAAGAAGCAACAACCAAATTCATCTGTCCCCCCTAAGCCAAGTGAAGAAAATCTCCGTTCCCCAATTTGCTGTATTATGGGTCATGTGGACACTGGTAAAACTAAACTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAAGGTGAGGCTGGTGGTATTACACAGCAGATTGGTGCAACATACTTTCCTGCTGAGAACATTCGTGAAAGAACAAAGGAACTAAAAGCAGATGCAAAGCTGAAAGTTCCAGGTCTACTGGTGATTGATACCCCTGGACACGAATCGTTTACTAACCTAAGGTCACGGGGTTCAGGTTTATGTGATATTGCAATTCTGGTTGTTGACATTATGCATGGCTTAGAACAACAGACAATAGAATCACTCAACCTATTGAAAATGAGAAATACAGAATTCATCGTTGCATTGAATAAGGTTGACCGTCTTTATGGTTGGAAAACATGTCGGAATGCTCCGATTGTTAAGGCAATGAAGCAGCAAACTAAGGATGTGCAAAATGAGTTCAATATGAGACTTACTCAGATTATCACCCAGCTCAAGGAGCAAGGGTTAAACACTGAGTTGTACTACAAAAACAAAGAAATGGGAGAAACCTTCAGTATTGTACCTACTAGTGCAATAAGTGGTGAAGGAATCCCAGATTTATTATTACTGTTGGTTCAGTGGACCCAGAAAACAATGGTTGAGAAACTAACATATATTGATGAAGTCCAGTGTACGGTTTTGGAGGTTAAGGTTGTTGAAGGTCATGGAACTACTATTGATGTTGTCTTGGTTAACGGTGTTCTTCATGAAGGAGATCAAATAGTTGTTTGTGGAATGCAGGGGCCTATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAGCTCCGTGTCAAGGGGACATATCTCCATCACAAAGAAATCAAGGCTGCTATGGGTATTAAAATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCACTGGTTTATATGTGGTGAAGCCTGAAGATGATTTAGAAGATGTTAAAGAATCAGCTATGGAAGATATGAAATCAGTAATGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTGCAGGCATCCACTCTCGGTTCATTGGAAGCATTGTTGGAGTTTCTGAAAACACCGGAAGTGAGTATTCCTGTAAGTGGTATAAGCATAGGCCCTGTCCATAAAAAGGATGTCATGAAGGCGAGTGTAATGcttgaaaagaagaaagagtttGCTGCTATCTTGGCATTTGATGTCAAAGTCAATCCTGAGGCAAAGGAACTGGCAGAAGAACTGGGTGTAAAGATTTTTATGGCTGATATCATTTATCACCTATTTGACCAATTTAAGGCCTATATTGACAATATTaaggaggaaaagaagaaagaagcagCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATCTTACCAAACTGCATTTTCAACAAGAAGGATCCAATTGTATTGGGAGTTGATATCATTGAAGGCATTGCAAAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGAGTTCATTGATATTGGTCGCATCGCATCCATTGAAAATAACCATAAGCCTGTTGATTATGCCAAGAAAGGCCAGAAAGTAGCCATCAAGATTGCTGGAAGCAATCCAGAGGAGCAACAAAAAATGTTTGGAAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATCTCAAGGAGATCAATTGATATTCTCAAAACCAATTATCGGGATGATCTGAGTATGGAGGAATGGAGGCTGGTTGTGAAATTGAAAAATGTTTTCAAGATACAATGA 4047 0.387 MGRKKPASREDDNPPAASQGGGKSKKKGLVIDDDEYSIGTELSEEVPPQEEKPVVTGKKKGKKGNLKASQAEDEDVENIMNDDDDEPEVVFTGKKKGKSKKGGGKSVFTASGFGLLGDEEDGENDDENDKFGLTGEPDDDDKPAVSFSGKKKPSKGSKKGGGSLFTASSFDAIDDDNEDEVIDDSVENRTEENDDLDEPVLAFTGKKKSSKNSKKGGATFTASTFGDTDGEQDKNENEKEDEDEDVAPITFSGKKKKSSKSSKKAVNSFSAAFADESAMDGEDKVEDEDISVVAFSGKKKSSNKKKKTATAKASDDFELDSESVDVAEPEQPSVADNNKANKSEEVTETSKNKKKKNKKSGRTAQEEEDLDKLLAELGEAPPVKPASQPQDDKVQAPSELAAPAAAVTGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAAAAGGAPDNEKKEDVKSETTEIKKNESKTKAADKKVPKHVREMQEALARRKEAEERKKREEEEKLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLAGTGAVSLPTGDSGAPAKRPIYQTKKSKQTHHQNGTAPVKAAEVVEAMENQETTPDVDSLEPEKVEVTESIQEEEKVETSEAVEEDEVEEDDVEDEWDAKSWDDVNLNGKSAFADEEADSEPEPLVKKDVKNAAPPAVAKSTGTVKKAVSQVPAEQVESKKPVENKKQDKKQQPNSSVPPKPSEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKAMKQQTKDVQNEFNMRLTQIITQLKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYIDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPEDDLEDVKESAMEDMKSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKKEFAAILAFDVKVNPEAKELAEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDIIEGIAKVGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIAGSNPEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDDLSMEEWRLVVKLKNVFKIQ 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2200 1348 Pfam Elongation factor Tu domain 2 995 1070 IPR004161 GO:0005525
Sto10g2200 1348 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 756 972 IPR000795 GO:0003924|GO:0005525
Sto10g2200 1348 CDD IF2_aeIF5B_IV 1219 1314 - -
Sto10g2200 1348 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1348 - -
Sto10g2200 1348 Coils Coil 418 443 - -
Sto10g2200 1348 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1348 IPR015760 -
Sto10g2200 1348 TIGRFAM small_GTP: small GTP-binding protein domain 761 887 IPR005225 GO:0005525
Sto10g2200 1348 MobiDBLite consensus disorder prediction 1 563 - -
Sto10g2200 1348 CDD aeIF5B_II 980 1090 - -
Sto10g2200 1348 Gene3D - 750 978 IPR027417 -
Sto10g2200 1348 Gene3D Translation factors 979 1099 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 450 563 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 683 697 - -
Sto10g2200 1348 PRINTS GTP-binding elongation factor signature 760 773 IPR000795 GO:0003924|GO:0005525
Sto10g2200 1348 PRINTS GTP-binding elongation factor signature 824 834 IPR000795 GO:0003924|GO:0005525
Sto10g2200 1348 PRINTS GTP-binding elongation factor signature 840 851 IPR000795 GO:0003924|GO:0005525
Sto10g2200 1348 PRINTS GTP-binding elongation factor signature 876 885 IPR000795 GO:0003924|GO:0005525
Sto10g2200 1348 Pfam Translation-initiation factor 2 1083 1197 IPR023115 -
Sto10g2200 1348 CDD IF2_eIF5B 759 969 - -
Sto10g2200 1348 Gene3D - 1100 1204 IPR036925 -
Sto10g2200 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 756 1047 IPR027417 -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 409 426 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 618 757 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 626 646 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 214 228 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 647 668 - -
Sto10g2200 1348 Coils Coil 479 550 - -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 360 375 - -
Sto10g2200 1348 SUPERFAMILY Translation proteins 1215 1347 IPR009000 -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 172 194 - -
Sto10g2200 1348 Pfam Elongation factor Tu GTP binding domain 760 968 IPR000795 GO:0003924|GO:0005525
Sto10g2200 1348 Gene3D Translation factors 1211 1348 - -
Sto10g2200 1348 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1081 1210 IPR036925 -
Sto10g2200 1348 MobiDBLite consensus disorder prediction 128 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2200 Sto-Chr10 31985412 31993731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2200 197 1348 Eukaryotic Initiation Factors Gene Family AT1G76810 67.144 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2200 K03243 - gmx:100814640 1623.22