Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2166 ATGATACTTTCTTACAAGTTAAATGAGCCAAACTTACTTTCTTATGGAAAGTTGGCTACCTTTAACGCCTTAATGACTCTATTTGTGTGTATGGTTGTCGGTGCTTATGGAAATTTGTCTCAAGGAGGTATTATTCCAGTAGGTGCTACTTTTGGTGATTTTGATTTGCCAGGATCAATGGGTGTTCATCAGCAAGCAGAGCACCCTCATAATATGCACCAAAATCAAACACATATACATTCCTCAATTCATGATAGCTTTCCTCTTACCATGGTAGCCTTGCAAAACTGTGATCAAACCATTTCAATGCCAGATTTCATTACTAAGGGAGATAGAAGCAAAAACTCCGGAAGTGACGATGACGACGAGCCGAGCTTTACGGAAGAAGGCGTTGATGGTCAAAACGAATTCGCAGCTAGAGGGAAAAAGGTTTCGCCATGGCAGCGTGTGAAGTGGACCAATGAGATGGTGAAGCTAATGATAACAACTCTTTCGTATGTAGGTGAGGATGTAAGTTCTGAcagtggaagaaggaaatttgTAGTCCTACAAATAAAGGGTAAGTGGAAATCTATTTCCAAGGTCATGGTTGAAAGGGGTTACCTTGTTTCGCCTCAACAATGCGAGGATAAATTCAATGATCTCAATAAGAGGTATAAAAGACTTAACGATATGGTTGGGAGGGGCATTAGTTGTCAGGTTGTTGAGAACCCTGCTTTATTGGATGTGATTGATTATCTTTCGGATAAAGAAAAAGACGATGTTCGAAAAATATTAAGCTCAAAACACTTGTTCTACAAAGAGATGTGTTCTTACCATAATGGTAATAGGTTGCATTTACCCCATGATCCAGCGTTGCAACGTTCACTACAAGCAGCTCTCAAACATAGAGATGATCATGATGAAGACGATCAAGATGTAGAAACAGATGAACTTGATGAATTTGAAGAGACTTATTGTGCATTAGGGGGACCTATGAAGAAATTGAAACACTACTGTCAAGGCCAAGATGAAACTAAAATGTTTGTGAATTCCTTAAGCAAAATTCAGTATGAGGCAAATCAAGGTTTACCCGAAAGCGCAAGAGCAGCTTGTTCACAGAAGCAATGGTTCGAGTCTCACAGAATTCAGTTAGAAGAGCAGAAGCTACAAATTCAGGCTCAGATGCTGGAGTTGGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGCAAGAAGAAGGACCAGAATTTGGAGAAGCTGAGGATGGAAAATGAGAAAATGAAGCTTGAAAACGATCGTATGGCTTTGGAACTGAAGAGAAAAGAAATGGGCTCTGGTTGA 1320 0.3939 MILSYKLNEPNLLSYGKLATFNALMTLFVCMVVGAYGNLSQGGIIPVGATFGDFDLPGSMGVHQQAEHPHNMHQNQTHIHSSIHDSFPLTMVALQNCDQTISMPDFITKGDRSKNSGSDDDDEPSFTEEGVDGQNEFAARGKKVSPWQRVKWTNEMVKLMITTLSYVGEDVSSDSGRRKFVVLQIKGKWKSISKVMVERGYLVSPQQCEDKFNDLNKRYKRLNDMVGRGISCQVVENPALLDVIDYLSDKEKDDVRKILSSKHLFYKEMCSYHNGNRLHLPHDPALQRSLQAALKHRDDHDEDDQDVETDELDEFEETYCALGGPMKKLKHYCQGQDETKMFVNSLSKIQYEANQGLPESARAACSQKQWFESHRIQLEEQKLQIQAQMLELEKQRFKWQRFSKKKDQNLEKLRMENEKMKLENDRMALELKRKEMGSG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2166 439 MobiDBLite consensus disorder prediction 105 140 - -
Sto10g2166 439 PANTHER F16F4.11 PROTEIN 37 437 - -
Sto10g2166 439 Coils Coil 375 395 - -
Sto10g2166 439 Coils Coil 403 432 - -
Sto10g2166 439 PANTHER F16F4.11 PROTEIN-RELATED 37 437 - -
Sto10g2166 439 Gene3D - 152 221 - -
Sto10g2166 439 Pfam Myb/SANT-like DNA-binding domain 149 271 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2166 Sto-Chr10 31609100 31612090 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto10g2166 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2166 - - gmx:100812134 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2166 10 31609100 31612090 Sto10g2166 10 31609100 31612090 ECH