Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2157 ATGCTGGGGGACTCAGCTGCGTTAGAAGGCGGTGCTAGCTCCGGGgaagcggcggcggcggcgggaGGCGGAGCTGCTGATTTGGCGGTTGCTGTTGCTGCGGCGGCGGCGGCCGGTGGTGGTGATGGATCCAATTTAGGTGAGGAGGACAGAGGGGGAGGGGATGACGGTGGCGGCGGTGACCGGAGTTTCGGCGGAAACCGGTGGCCGCGCCaggagactcttgctctcttaCAGATACGCTCCGACATGGACGTGGCGTTTCGAGATGCCAGCGTGAAGGGTCCCTTGTGGGAAGAGCTAGCCGAGTTGGGATACCATCGAAACGCAAAGAAATGCAAGGAGAAATTCGAGAACGTTTATAAGTATCACAAGCGAACCAAGGAAGGCCGTACCGGAAAACCTGATGGCAAAACCTATCgtttctttgatcaattagaAGCTCTCGATCATCAGCACCACCATAGTAATTCGGCTGCTATTCCGGCACCACCGGTTTCCTCGGTCGTCTTCGCCGCCACTCAACCTCCGAAATTGATGGCGGCTCCACCAGTAACGGCCAATCCTCCTCCGCCTCCACCTCCTCAACCTCCTCATGGTGCTAGTACTACTACTGTTCCATCAATAAATACTACAATTCCTCCGTTTTATCCGGCGCAACCGGTGCAaccaccgccaccgccaccgCCAGCAAACCCTACCTCTTTCATTCCCTCCTCCTTCGCCGGCATTCCTACGGATCTCCTGTCGAACTCCAGCTCGTCGACGTCCACGTCGTCCGACGAGGCGATGATGGCGGAGGCGCAGCGGCGGAAGCGGAAGCGGAAGTGGAAGGACTTCTTCGAGAGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTGCAGAAGAGGTTCCTGGAGGCGATCGAGAAACGCGAGCACGAGAGGATGGTTCGAGAAGAAGCCTGGAGAATGCAGGAGATGGCGAGGATCAACAAGGAGAGAGAAATTCTGGCGCAGGAGAGATCCATCGCCGCCGCCAAAGATGCCGCCGTCATGAACTTCTTGCAGAAAATCGCCGAACAGCAGAATCTCGGATCCGGACcatcgccgccgccgccgcagcCGATGCCGAATATTAATATCGTTAATCCTCCACCTCATGTTCCTCCGCTTCCGCCTCCGCCGCTGCAACCGCAAACGACGGCGCCAGTGCAGCAACAAACAACTCTGACTCCTATTCTTTCTACTCCACCGCTTCCGCCACCGCCATCCTCAACGACGATGCAGCAGGTGATAACACCGAGTATGAACATTATCACAAAGGACGATAATGGAGAGAACAACAATAATTTGACGGCGGCGACGTCGTCGAGGTGGCCGAAAGTGGAGGTGGAGACGTTGATCAAACTACGGACTAACCTGGACGCGAAGTACCAGGAGAACGGTCCCAAGGGGCCGCTGTGGGAGGAGATCTCGGCCGCGATGAGGCGGCACGGGTACAACCGGAATGCGAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAGGCGACCAGAAGATTCCAAGACCTGTCCCTACTTCCACCAATTGGATGCGCTATACAGGGAAAAGAGTTTCAAGATGCTGTCCTCCTCGTCGGCGGCGCCGCCTCCGACGGCGGAGAACATGATGGCTGCGCCGCTAATGGTGCGGCCAGAGCAGCAGTGGCCGCCGCAGAAGCAGCAGCAGCAACCGCCGGGGACGATGGATCAGGTCATGAATGATGATCCAATGGAAGGAgacgaagaggaagaagataaggatagagaggaagaagatgaagatgaagaggaCGAAGGAGGAAGTAACAACTATGAGATAGTGGCAAGCAAGCCTGCGAATTCAGTAGGCACTTCAGAGTGA 1920 0.5188 MLGDSAALEGGASSGEAAAAAGGGAADLAVAVAAAAAAGGGDGSNLGEEDRGGGDDGGGGDRSFGGNRWPRQETLALLQIRSDMDVAFRDASVKGPLWEELAELGYHRNAKKCKEKFENVYKYHKRTKEGRTGKPDGKTYRFFDQLEALDHQHHHSNSAAIPAPPVSSVVFAATQPPKLMAAPPVTANPPPPPPPQPPHGASTTTVPSINTTIPPFYPAQPVQPPPPPPPANPTSFIPSSFAGIPTDLLSNSSSSTSTSSDEAMMAEAQRRKRKRKWKDFFERLMKEVIEKQEELQKRFLEAIEKREHERMVREEAWRMQEMARINKEREILAQERSIAAAKDAAVMNFLQKIAEQQNLGSGPSPPPPQPMPNINIVNPPPHVPPLPPPPLQPQTTAPVQQQTTLTPILSTPPLPPPPSSTTMQQVITPSMNIITKDDNGENNNNLTAATSSRWPKVEVETLIKLRTNLDAKYQENGPKGPLWEEISAAMRRHGYNRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYREKSFKMLSSSSAAPPPTAENMMAAPLMVRPEQQWPPQKQQQQPPGTMDQVMNDDPMEGDEEEEDKDREEEDEDEEDEGGSNNYEIVASKPANSVGTSE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2157 639 MobiDBLite consensus disorder prediction 180 267 - -
Sto10g2157 639 Pfam Myb/SANT-like DNA-binding domain 67 149 IPR044822 -
Sto10g2157 639 Pfam Myb/SANT-like DNA-binding domain 452 539 IPR044822 -
Sto10g2157 639 MobiDBLite consensus disorder prediction 182 201 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 202 216 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 217 235 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 574 589 - -
Sto10g2157 639 ProSiteProfiles Myb-like domain profile. 452 510 IPR001005 -
Sto10g2157 639 Coils Coil 278 305 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 38 68 - -
Sto10g2157 639 CDD GT1 67 128 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 594 621 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 357 401 - -
Sto10g2157 639 CDD GT1 452 517 - -
Sto10g2157 639 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 630 - -
Sto10g2157 639 Gene3D - 69 126 - -
Sto10g2157 639 Gene3D - 454 515 - -
Sto10g2157 639 PANTHER - 1 630 - -
Sto10g2157 639 SMART sant 65 123 IPR001005 -
Sto10g2157 639 SMART sant 450 512 IPR001005 -
Sto10g2157 639 ProSiteProfiles Myb-like domain profile. 67 121 IPR001005 -
Sto10g2157 639 MobiDBLite consensus disorder prediction 236 264 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 361 395 - -
Sto10g2157 639 MobiDBLite consensus disorder prediction 571 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2157 Sto-Chr10 31526328 31529065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2157 61 575 Trihelix Transcription Factor Family AT1G76880 54.562 9.97e-161 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto10g2157 Myb_DNA-bind_4 2.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2157 - - jre:109011419 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g2157 10 31526328 31529065 Sto10g2157 10 31526328 31529065 ECH