Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2147 ATGGATATTATTGCAACAAATTCAGGTGATGATATTGAGAAGAGAAGTGGAGGAGGAAACCGGTGGCCCCGCCAGGAAACTTTTGCTCTCTTGAAGATAAGGAAATTGGCAGAACTTGGATATCACCGAAGTGCGAAGAAATGCAAAGAGAAATTCGAGAACGTGTacaagtaccacaagagaaccaAAGAGAGTAGAAGTGGGAAACCAGAAGGGAAAACCTACAAgttctttgatcaattacaagCCCTTGAAAATCAATTCACCATCTCTCATACTCCGAAACCACTACTGTCGCCACCACCACAGCCGCCGCCGCCACCGCAGcaacaaaaaattatacaacCGCAATTACAACCGCAACCGCAACTTCCTTTCCAAACAAGGCCTAACAATAATGAGCTTACAACAAATATCTCTTATGTTGTTAGcgctaccaccaccaccaccaccactgccGCTACTGTTCCATCTAGTATAAACCCGGTTCCCAATGTTGCTACTACTACCACCATAAATAACCCTAGGAATCTACCAAACATGAACTTTTTCTCTGCCACGACCACGACTTCGACCTCGTCCTCTACTGCGTCCGACGAGGACATGGAAGAGAGGTACCGGAAGAAGCGAAAGCTGAAGGACTACTTCCGGAGGCTGACGAGGCAGGTGCTGGCGAAGCAGGAGGAGATGCAGAAGAGGTTTCTAGAAGCCATAGAAAAGAGAGAGCGCGAGAGGGCGGCCCAACAAGACGCATGGAGGGTCCAAGAAATGGCGAGGATCAACCGAGAGCACGACATCCTCGTCCAAGAGAGATCCACCGCCGCGGCCAAGGACGCCGCCGTCATCGCATTCCTCCAAAAGCTCTCCGGCGGGCCGCAACAAAACCCCTCCCCAACACCGCCGCCAGCGCCGCCACCGACAAACCCGCCCACTCCGGCGCCGCGACCGCCGCAACAAATACTCCAACAACCACCACAGGTGATGATGTTGcctaataacaacaacaacaacaacaccTTCGAAATCCAAAAGGCGAACATGAACAACGGCCACGGCCATCAGGGCGGCGGCTCCTCCTCTTCTTTGTCCTCCCGGTGGCCGAAGGCCGAAGTGCATGCGTTGATACGGCTGAGGACGAGTCTGGACCCGAAGTATCAGGAGAATGGGCCGAAAGGCCCACTGTGGGAGGACATATCGGCCGGAATGCAGAGACTCGGATACCACAGGAGCGCCAAGAGATGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAATAAGCAAAGGCGCGAGGATAGCAAGACATGCCCCTACTTCCACGAGCTCGACGCTCTATACAAAGAGAAAACCAGAAGCAACAACAACACCGCGATCTTCGGCGGCACGACGACGAATAAGCCGACAAGCCACGAGATGCTGATGGAGCCGCTAATGGTGCAACCGGAGCAACAATGGCGGCCTCCTCCGGTCGAGGAAGGCGGCGGTGGGAATGCGAATAATATGGTTCAGCAGCGAAGACACGACGAAGAAGAAGattatgaagaagaagaagatgaagaagaggacattgatgatgatatggaagaagatggagagagtatggaagaagaagatcaaGAAGGACGTTATGAGATGGCAGCttcagcagcagcagcaactACAAATAATAAACTTCCTTCCGTTGAATGA 1707 0.461 MDIIATNSGDDIEKRSGGGNRWPRQETFALLKIRKLAELGYHRSAKKCKEKFENVYKYHKRTKESRSGKPEGKTYKFFDQLQALENQFTISHTPKPLLSPPPQPPPPPQQQKIIQPQLQPQPQLPFQTRPNNNELTTNISYVVSATTTTTTTAATVPSSINPVPNVATTTTINNPRNLPNMNFFSATTTTSTSSSTASDEDMEERYRKKRKLKDYFRRLTRQVLAKQEEMQKRFLEAIEKRERERAAQQDAWRVQEMARINREHDILVQERSTAAAKDAAVIAFLQKLSGGPQQNPSPTPPPAPPPTNPPTPAPRPPQQILQQPPQVMMLPNNNNNNNTFEIQKANMNNGHGHQGGGSSSSLSSRWPKAEVHALIRLRTSLDPKYQENGPKGPLWEDISAGMQRLGYHRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELDALYKEKTRSNNNTAIFGGTTTNKPTSHEMLMEPLMVQPEQQWRPPPVEEGGGGNANNMVQQRRHDEEEDYEEEEDEEEDIDDDMEEDGESMEEEDQEGRYEMAASAAAATTNNKLPSVE 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2147 568 MobiDBLite consensus disorder prediction 289 364 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 186 205 - -
Sto10g2147 568 PANTHER - 10 34 - -
Sto10g2147 568 PANTHER - 34 558 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 95 113 - -
Sto10g2147 568 Pfam Myb/SANT-like DNA-binding domain 34 84 IPR044822 -
Sto10g2147 568 Pfam Myb/SANT-like DNA-binding domain 364 451 IPR044822 -
Sto10g2147 568 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 10 34 - -
Sto10g2147 568 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 34 558 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 490 568 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 1 23 - -
Sto10g2147 568 Gene3D - 33 61 - -
Sto10g2147 568 Gene3D - 366 427 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 92 114 - -
Sto10g2147 568 Coils Coil 505 532 - -
Sto10g2147 568 Coils Coil 224 244 - -
Sto10g2147 568 CDD GT1 365 429 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 294 321 - -
Sto10g2147 568 ProSiteProfiles Myb-like domain profile. 358 422 IPR001005 -
Sto10g2147 568 MobiDBLite consensus disorder prediction 516 545 - -
Sto10g2147 568 MobiDBLite consensus disorder prediction 322 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2147 Sto-Chr10 31361921 31364327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2147 17 458 Trihelix Transcription Factor Family AT1G76890 46.407 6.90e-119 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto10g2147 Myb_DNA-bind_4 2.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2147 - - gmx:100799041 502.671