Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g2127 TTGGGGCAATTTGGCGTATATGCCAAAGAAGTATGGGATAACACATCATTGGCTGCGAAgatcttttgttttcttcaCGTTACTGCAGAATATTTCGTGGACTATGCTATTACCTTTGGTCCTAGCATGCTTCCGACAATTGGTGTGGAGGATGGCGTTTTATTGACAGAAAAGATTTCCACTCGGTTTGGTAGAGTTGGTCGCGGAGATATTGTCGTTGTGAGGTCTCTAGACAACCCTGAGAAGTTCACTACCAAGCGATTGATTGGATTGGAGGGTGATAGCATCACATATGTTGTGGATCCTAAGACCAGTGATGAATGCAAGACTACTGTggtatga 342 0.4123 LGQFGVYAKEVWDNTSLAAKIFCFLHVTAEYFVDYAITFGPSMLPTIGVEDGVLLTEKISTRFGRVGRGDIVVVRSLDNPEKFTTKRLIGLEGDSITYVVDPKTSDECKTTVV 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g2127 113 SUPERFAMILY LexA/Signal peptidase 32 99 IPR036286 -
Sto10g2127 113 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 3 113 - -
Sto10g2127 113 CDD S26_SPase_I 40 94 IPR019533 GO:0004252|GO:0006465
Sto10g2127 113 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 3 113 - -
Sto10g2127 113 Gene3D Umud Fragment, subunit A 40 109 - -
Sto10g2127 113 Pfam Signal peptidase, peptidase S26 20 98 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g2127 Sto-Chr10 31139522 31139964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g2127 43 113 MADS-box Gene Family AT1G29960 52.113 2.40e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g2127 K09647 - nnu:104610480 126.331